Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col11a1Q61245 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.83■□□□□ 0.6
Col11a1Q61245 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.83■□□□□ 0.6
Col11a1Q61245 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.83■□□□□ 0.6
Col11a1Q61245 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col11a1Q61245 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Col11a1Q61245 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Col11a1Q61245 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.83■□□□□ 0.6
Col11a1Q61245 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col11a1Q61245 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Col11a1Q61245 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a1Q61245 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a1Q61245 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Col11a1Q61245 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.82■□□□□ 0.6
Col11a1Q61245 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.82■□□□□ 0.6
Col11a1Q61245 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.82■□□□□ 0.6
Col11a1Q61245 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Col11a1Q61245 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.82■□□□□ 0.6
Col11a1Q61245 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a1Q61245 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a1Q61245 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Col11a1Q61245 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a1Q61245 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a1Q61245 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a1Q61245 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a1Q61245 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a1Q61245 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a1Q61245 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a1Q61245 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a1Q61245 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Col11a1Q61245 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.81■□□□□ 0.6
Col11a1Q61245 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a1Q61245 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a1Q61245 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a1Q61245 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.8■□□□□ 0.6
Col11a1Q61245 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a1Q61245 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a1Q61245 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.8■□□□□ 0.6
Col11a1Q61245 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a1Q61245 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Col11a1Q61245 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a1Q61245 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a1Q61245 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a1Q61245 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a1Q61245 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a1Q61245 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a1Q61245 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col11a1Q61245 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col11a1Q61245 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col11a1Q61245 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col11a1Q61245 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col11a1Q61245 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col11a1Q61245 Mir3113-201ENSMUST00000175478 76 ntBASIC18.79■□□□□ 0.6
Col11a1Q61245 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col11a1Q61245 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.79■□□□□ 0.6
Col11a1Q61245 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col11a1Q61245 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col11a1Q61245 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col11a1Q61245 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col11a1Q61245 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col11a1Q61245 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col11a1Q61245 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col11a1Q61245 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.79■□□□□ 0.6
Col11a1Q61245 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.79■□□□□ 0.6
Col11a1Q61245 Gm25406-201ENSMUST00000157599 105 ntBASIC18.79■□□□□ 0.6
Col11a1Q61245 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
Col11a1Q61245 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col11a1Q61245 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.79■□□□□ 0.6
Col11a1Q61245 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col11a1Q61245 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.78■□□□□ 0.6
Col11a1Q61245 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col11a1Q61245 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col11a1Q61245 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col11a1Q61245 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col11a1Q61245 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.78■□□□□ 0.6
Col11a1Q61245 Gm5682-201ENSMUST00000173402 505 ntBASIC18.78■□□□□ 0.6
Col11a1Q61245 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Col11a1Q61245 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col11a1Q61245 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col11a1Q61245 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col11a1Q61245 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.78■□□□□ 0.6
Col11a1Q61245 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col11a1Q61245 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Col11a1Q61245 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.77■□□□□ 0.6
Col11a1Q61245 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Col11a1Q61245 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.77■□□□□ 0.6
Col11a1Q61245 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col11a1Q61245 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col11a1Q61245 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.77■□□□□ 0.59
Col11a1Q61245 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col11a1Q61245 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.77■□□□□ 0.59
Col11a1Q61245 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col11a1Q61245 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.77■□□□□ 0.59
Col11a1Q61245 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Col11a1Q61245 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.77■□□□□ 0.59
Col11a1Q61245 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Col11a1Q61245 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.76■□□□□ 0.59
Col11a1Q61245 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.76■□□□□ 0.59
Col11a1Q61245 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Col11a1Q61245 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms