Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scarb1Q61009 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scarb1Q61009 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scarb1Q61009 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scarb1Q61009 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Scarb1Q61009 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scarb1Q61009 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scarb1Q61009 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scarb1Q61009 Flg-201ENSMUST00000050758 1488 ntBASIC14.21□□□□□ -0.13
Scarb1Q61009 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.21□□□□□ -0.13
Scarb1Q61009 Mir2861-201ENSMUST00000175539 82 ntBASIC14.21□□□□□ -0.13
Scarb1Q61009 AV356131-201ENSMUST00000206201 750 ntBASIC14.21□□□□□ -0.13
Scarb1Q61009 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.21□□□□□ -0.13
Scarb1Q61009 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Scarb1Q61009 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Scarb1Q61009 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scarb1Q61009 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Scarb1Q61009 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scarb1Q61009 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scarb1Q61009 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scarb1Q61009 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scarb1Q61009 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scarb1Q61009 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.21□□□□□ -0.13
Scarb1Q61009 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scarb1Q61009 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scarb1Q61009 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scarb1Q61009 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Scarb1Q61009 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scarb1Q61009 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scarb1Q61009 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scarb1Q61009 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scarb1Q61009 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scarb1Q61009 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scarb1Q61009 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scarb1Q61009 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scarb1Q61009 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Scarb1Q61009 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scarb1Q61009 Gm13401-201ENSMUST00000117074 291 ntBASIC14.2□□□□□ -0.14
Scarb1Q61009 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.2□□□□□ -0.14
Scarb1Q61009 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scarb1Q61009 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
Scarb1Q61009 Gm44549-201ENSMUST00000208351 577 ntBASIC14.2□□□□□ -0.14
Scarb1Q61009 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scarb1Q61009 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scarb1Q61009 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scarb1Q61009 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.2□□□□□ -0.14
Scarb1Q61009 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scarb1Q61009 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scarb1Q61009 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scarb1Q61009 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Scarb1Q61009 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.19□□□□□ -0.14
Scarb1Q61009 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Gm7290-201ENSMUST00000104990 617 ntBASIC14.19□□□□□ -0.14
Scarb1Q61009 Gm12918-201ENSMUST00000120234 636 ntBASIC14.19□□□□□ -0.14
Scarb1Q61009 Gm15710-201ENSMUST00000121821 636 ntBASIC14.19□□□□□ -0.14
Scarb1Q61009 Gm6211-202ENSMUST00000167849 925 ntBASIC14.19□□□□□ -0.14
Scarb1Q61009 Gm5075-201ENSMUST00000196916 622 ntBASIC14.19□□□□□ -0.14
Scarb1Q61009 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.19□□□□□ -0.14
Scarb1Q61009 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.19□□□□□ -0.14
Scarb1Q61009 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scarb1Q61009 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Scarb1Q61009 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scarb1Q61009 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb1Q61009 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb1Q61009 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb1Q61009 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb1Q61009 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb1Q61009 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb1Q61009 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb1Q61009 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb1Q61009 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb1Q61009 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.18□□□□□ -0.14
Scarb1Q61009 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.18□□□□□ -0.14
Scarb1Q61009 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.18□□□□□ -0.14
Scarb1Q61009 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb1Q61009 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb1Q61009 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb1Q61009 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb1Q61009 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Scarb1Q61009 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb1Q61009 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb1Q61009 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms