Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-3Q5R1C3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-3Q5R1C3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Gm27454-201ENSMUST00000185090 204 ntBASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Gm6139-201ENSMUST00000079261 882 ntBASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-3Q5R1C3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav3-3Q5R1C3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav3-3Q5R1C3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms