Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Shisa3Q3UPR0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa3Q3UPR0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa3Q3UPR0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa3Q3UPR0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa3Q3UPR0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa3Q3UPR0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa3Q3UPR0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Gm20760-201ENSMUST00000179197 648 ntBASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa3Q3UPR0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Shisa3Q3UPR0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa3Q3UPR0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa3Q3UPR0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa3Q3UPR0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa3Q3UPR0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Shisa3Q3UPR0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa3Q3UPR0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.52□□□□□ -0.08
Shisa3Q3UPR0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Shisa3Q3UPR0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa3Q3UPR0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa3Q3UPR0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa3Q3UPR0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.52□□□□□ -0.08
Shisa3Q3UPR0 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.52□□□□□ -0.09
Shisa3Q3UPR0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa3Q3UPR0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa3Q3UPR0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa3Q3UPR0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa3Q3UPR0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa3Q3UPR0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa3Q3UPR0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa3Q3UPR0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa3Q3UPR0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa3Q3UPR0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa3Q3UPR0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa3Q3UPR0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 Flg-201ENSMUST00000050758 1488 ntBASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 Zfp783-201ENSMUST00000095946 670 ntBASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.51□□□□□ -0.09
Shisa3Q3UPR0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 Gm11249-201ENSMUST00000117071 859 ntBASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa3Q3UPR0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms