Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smn1P97801 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Smn1P97801 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Smn1P97801 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smn1P97801 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smn1P97801 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smn1P97801 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smn1P97801 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smn1P97801 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.46□□□□□ -0.09
Smn1P97801 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smn1P97801 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smn1P97801 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smn1P97801 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.46□□□□□ -0.09
Smn1P97801 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smn1P97801 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.46□□□□□ -0.09
Smn1P97801 Gm10138-203ENSMUST00000206952 366 ntBASIC14.46□□□□□ -0.09
Smn1P97801 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smn1P97801 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smn1P97801 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smn1P97801 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smn1P97801 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smn1P97801 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Smn1P97801 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smn1P97801 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smn1P97801 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smn1P97801 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smn1P97801 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smn1P97801 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smn1P97801 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smn1P97801 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smn1P97801 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Smn1P97801 Gm15375-201ENSMUST00000119510 849 ntBASIC14.45□□□□□ -0.1
Smn1P97801 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smn1P97801 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Smn1P97801 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.45□□□□□ -0.1
Smn1P97801 Mir5133-201ENSMUST00000174955 77 ntBASIC14.45□□□□□ -0.1
Smn1P97801 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smn1P97801 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Smn1P97801 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.45□□□□□ -0.1
Smn1P97801 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smn1P97801 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Smn1P97801 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smn1P97801 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smn1P97801 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smn1P97801 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smn1P97801 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smn1P97801 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smn1P97801 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smn1P97801 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smn1P97801 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smn1P97801 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.44□□□□□ -0.1
Smn1P97801 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smn1P97801 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.44□□□□□ -0.1
Smn1P97801 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smn1P97801 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.44□□□□□ -0.1
Smn1P97801 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Gm4968-201ENSMUST00000071458 858 ntBASIC14.44□□□□□ -0.1
Smn1P97801 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smn1P97801 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Smn1P97801 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smn1P97801 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smn1P97801 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Smn1P97801 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smn1P97801 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smn1P97801 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Smn1P97801 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smn1P97801 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Smn1P97801 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.43□□□□□ -0.1
Smn1P97801 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Smn1P97801 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smn1P97801 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.43□□□□□ -0.1
Smn1P97801 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Smn1P97801 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smn1P97801 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smn1P97801 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smn1P97801 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Smn1P97801 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smn1P97801 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smn1P97801 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.43□□□□□ -0.1
Smn1P97801 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Smn1P97801 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smn1P97801 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smn1P97801 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms