Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim43cP86449 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim43cP86449 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trim43cP86449 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.28■□□□□ 0.52
Trim43cP86449 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.28■□□□□ 0.52
Trim43cP86449 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim43cP86449 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim43cP86449 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim43cP86449 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim43cP86449 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim43cP86449 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim43cP86449 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim43cP86449 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.27■□□□□ 0.52
Trim43cP86449 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim43cP86449 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim43cP86449 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.27■□□□□ 0.52
Trim43cP86449 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim43cP86449 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim43cP86449 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim43cP86449 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim43cP86449 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Trim43cP86449 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim43cP86449 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trim43cP86449 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim43cP86449 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim43cP86449 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim43cP86449 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Trim43cP86449 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43cP86449 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43cP86449 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43cP86449 Gm13474-201ENSMUST00000122466 815 ntBASIC18.26■□□□□ 0.51
Trim43cP86449 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trim43cP86449 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trim43cP86449 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43cP86449 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43cP86449 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trim43cP86449 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43cP86449 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43cP86449 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43cP86449 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43cP86449 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trim43cP86449 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43cP86449 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43cP86449 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43cP86449 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43cP86449 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Trim43cP86449 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43cP86449 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43cP86449 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43cP86449 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trim43cP86449 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43cP86449 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trim43cP86449 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim43cP86449 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trim43cP86449 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim43cP86449 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim43cP86449 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim43cP86449 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim43cP86449 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim43cP86449 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.25■□□□□ 0.51
Trim43cP86449 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim43cP86449 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Trim43cP86449 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim43cP86449 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.25■□□□□ 0.51
Trim43cP86449 Mir1668-201ENSMUST00000184114 107 ntBASIC18.25■□□□□ 0.51
Trim43cP86449 Gm44450-201ENSMUST00000199528 114 ntBASIC18.25■□□□□ 0.51
Trim43cP86449 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.25■□□□□ 0.51
Trim43cP86449 Gm7213-201ENSMUST00000215977 950 ntBASIC18.25■□□□□ 0.51
Trim43cP86449 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.25■□□□□ 0.51
Trim43cP86449 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim43cP86449 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim43cP86449 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim43cP86449 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim43cP86449 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.25■□□□□ 0.51
Trim43cP86449 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim43cP86449 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43cP86449 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43cP86449 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43cP86449 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trim43cP86449 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43cP86449 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43cP86449 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43cP86449 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trim43cP86449 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43cP86449 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43cP86449 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trim43cP86449 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43cP86449 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43cP86449 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43cP86449 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43cP86449 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43cP86449 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43cP86449 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43cP86449 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43cP86449 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43cP86449 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43cP86449 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43cP86449 Mir5130-201ENSMUST00000175160 84 ntBASIC18.23■□□□□ 0.51
Trim43cP86449 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Trim43cP86449 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms