Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp3P63024 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vamp3P63024 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC12.99□□□□□ -0.33
Vamp3P63024 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp3P63024 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp3P63024 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp3P63024 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vamp3P63024 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.99□□□□□ -0.33
Vamp3P63024 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp3P63024 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp3P63024 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp3P63024 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vamp3P63024 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp3P63024 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp3P63024 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vamp3P63024 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.98□□□□□ -0.33
Vamp3P63024 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vamp3P63024 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vamp3P63024 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Vamp3P63024 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vamp3P63024 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.98□□□□□ -0.33
Vamp3P63024 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC12.98□□□□□ -0.33
Vamp3P63024 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC12.98□□□□□ -0.33
Vamp3P63024 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vamp3P63024 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.98□□□□□ -0.33
Vamp3P63024 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vamp3P63024 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp3P63024 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Vamp3P63024 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.97□□□□□ -0.33
Vamp3P63024 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp3P63024 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vamp3P63024 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Vamp3P63024 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp3P63024 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp3P63024 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp3P63024 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vamp3P63024 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp3P63024 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp3P63024 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Vamp3P63024 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp3P63024 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp3P63024 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.96□□□□□ -0.33
Vamp3P63024 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Vamp3P63024 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp3P63024 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Vamp3P63024 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp3P63024 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vamp3P63024 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp3P63024 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Vamp3P63024 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.96□□□□□ -0.33
Vamp3P63024 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC12.96□□□□□ -0.33
Vamp3P63024 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp3P63024 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp3P63024 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp3P63024 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp3P63024 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp3P63024 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vamp3P63024 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Vamp3P63024 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vamp3P63024 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms