Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TubP50586 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TubP50586 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
TubP50586 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TubP50586 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TubP50586 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TubP50586 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.24■□□□□ 0.35
TubP50586 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TubP50586 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TubP50586 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TubP50586 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TubP50586 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TubP50586 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TubP50586 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TubP50586 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TubP50586 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.23■□□□□ 0.35
TubP50586 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TubP50586 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TubP50586 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.23■□□□□ 0.35
TubP50586 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TubP50586 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TubP50586 Gm27389-201ENSMUST00000183622 195 ntBASIC17.23■□□□□ 0.35
TubP50586 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TubP50586 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TubP50586 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TubP50586 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TubP50586 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TubP50586 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.23■□□□□ 0.35
TubP50586 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TubP50586 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TubP50586 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TubP50586 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TubP50586 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TubP50586 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TubP50586 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TubP50586 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TubP50586 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TubP50586 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.22■□□□□ 0.35
TubP50586 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TubP50586 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TubP50586 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TubP50586 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TubP50586 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TubP50586 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TubP50586 Gm10013-201ENSMUST00000106074 672 ntBASIC17.22■□□□□ 0.35
TubP50586 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TubP50586 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TubP50586 Gm26039-201ENSMUST00000158152 144 ntBASIC17.22■□□□□ 0.35
TubP50586 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.22■□□□□ 0.35
TubP50586 Gm21559-201ENSMUST00000220638 855 ntBASIC17.22■□□□□ 0.35
TubP50586 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TubP50586 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TubP50586 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TubP50586 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
TubP50586 Gm8587-201ENSMUST00000076538 843 ntBASIC17.22■□□□□ 0.35
TubP50586 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TubP50586 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TubP50586 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TubP50586 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TubP50586 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TubP50586 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TubP50586 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TubP50586 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TubP50586 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TubP50586 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TubP50586 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TubP50586 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TubP50586 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TubP50586 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TubP50586 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TubP50586 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TubP50586 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TubP50586 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TubP50586 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TubP50586 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TubP50586 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
TubP50586 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
TubP50586 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TubP50586 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
TubP50586 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TubP50586 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms