Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Fen1P39749 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Fen1P39749 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Fen1P39749 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Fen1P39749 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Fen1P39749 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.95■□□□□ 0.3
Fen1P39749 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.95■□□□□ 0.3
Fen1P39749 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.95■□□□□ 0.3
Fen1P39749 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Fen1P39749 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Fen1P39749 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fen1P39749 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fen1P39749 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fen1P39749 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Fen1P39749 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fen1P39749 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.94■□□□□ 0.3
Fen1P39749 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fen1P39749 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fen1P39749 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fen1P39749 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fen1P39749 Gm13216-201ENSMUST00000117145 591 ntBASIC16.94■□□□□ 0.3
Fen1P39749 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fen1P39749 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fen1P39749 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fen1P39749 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Fen1P39749 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fen1P39749 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Fen1P39749 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fen1P39749 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fen1P39749 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fen1P39749 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fen1P39749 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Fen1P39749 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.93■□□□□ 0.3
Fen1P39749 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Fen1P39749 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.93■□□□□ 0.3
Fen1P39749 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Gm11927-201ENSMUST00000118472 759 ntBASIC16.93■□□□□ 0.3
Fen1P39749 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.93■□□□□ 0.3
Fen1P39749 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.93■□□□□ 0.3
Fen1P39749 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.93■□□□□ 0.3
Fen1P39749 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.93■□□□□ 0.3
Fen1P39749 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Fen1P39749 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Fen1P39749 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.92■□□□□ 0.3
Fen1P39749 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Fen1P39749 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Fen1P39749 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Fen1P39749 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.92■□□□□ 0.3
Fen1P39749 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Fen1P39749 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Fen1P39749 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Fen1P39749 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.92■□□□□ 0.3
Fen1P39749 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.92■□□□□ 0.3
Fen1P39749 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Fen1P39749 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.92■□□□□ 0.3
Fen1P39749 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Fen1P39749 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Fen1P39749 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Fen1P39749 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Fen1P39749 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.92■□□□□ 0.3
Fen1P39749 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Fen1P39749 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Fen1P39749 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms