Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cd40P27512 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40P27512 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40P27512 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40P27512 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40P27512 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40P27512 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40P27512 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40P27512 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40P27512 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd40P27512 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd40P27512 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.21■□□□□ 0.03
Cd40P27512 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cd40P27512 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.21■□□□□ 0.03
Cd40P27512 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd40P27512 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd40P27512 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd40P27512 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd40P27512 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.21■□□□□ 0.03
Cd40P27512 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd40P27512 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd40P27512 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cd40P27512 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.21■□□□□ 0.03
Cd40P27512 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd40P27512 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.21■□□□□ 0.03
Cd40P27512 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cd40P27512 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.21■□□□□ 0.03
Cd40P27512 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd40P27512 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd40P27512 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd40P27512 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd40P27512 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cd40P27512 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cd40P27512 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd40P27512 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd40P27512 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.2■□□□□ 0.02
Cd40P27512 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cd40P27512 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd40P27512 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cd40P27512 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd40P27512 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cd40P27512 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd40P27512 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Cd40P27512 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
Cd40P27512 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.2■□□□□ 0.02
Cd40P27512 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cd40P27512 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Cd40P27512 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.2■□□□□ 0.02
Cd40P27512 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.2■□□□□ 0.02
Cd40P27512 Gm18115-201ENSMUST00000221209 621 ntBASIC15.2■□□□□ 0.02
Cd40P27512 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd40P27512 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd40P27512 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd40P27512 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd40P27512 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd40P27512 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd40P27512 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd40P27512 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Cd40P27512 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Cd40P27512 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.19■□□□□ 0.02
Cd40P27512 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Mir7071-201ENSMUST00000184847 69 ntBASIC15.19■□□□□ 0.02
Cd40P27512 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.19■□□□□ 0.02
Cd40P27512 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cd40P27512 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cd40P27512 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cd40P27512 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cd40P27512 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd40P27512 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd40P27512 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd40P27512 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cd40P27512 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.18■□□□□ 0.02
Cd40P27512 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cd40P27512 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cd40P27512 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cd40P27512 Gm13216-201ENSMUST00000117145 591 ntBASIC15.18■□□□□ 0.02
Cd40P27512 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.18■□□□□ 0.02
Cd40P27512 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.18■□□□□ 0.02
Cd40P27512 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cd40P27512 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cd40P27512 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.18■□□□□ 0.02
Cd40P27512 Gm18101-201ENSMUST00000215769 548 ntBASIC15.18■□□□□ 0.02
Cd40P27512 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd40P27512 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms