Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.6□□□□□ -0.23
Cdx1P18111 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdx1P18111 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx1P18111 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Cdx1P18111 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdx1P18111 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdx1P18111 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.59□□□□□ -0.23
Cdx1P18111 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.59□□□□□ -0.23
Cdx1P18111 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.59□□□□□ -0.23
Cdx1P18111 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.59□□□□□ -0.23
Cdx1P18111 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdx1P18111 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cdx1P18111 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cdx1P18111 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdx1P18111 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx1P18111 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Cdx1P18111 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdx1P18111 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdx1P18111 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdx1P18111 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdx1P18111 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdx1P18111 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdx1P18111 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cdx1P18111 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx1P18111 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.58□□□□□ -0.24
Cdx1P18111 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx1P18111 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx1P18111 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx1P18111 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx1P18111 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx1P18111 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx1P18111 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx1P18111 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdx1P18111 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cdx1P18111 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx1P18111 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx1P18111 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cdx1P18111 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx1P18111 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx1P18111 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cdx1P18111 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Cdx1P18111 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx1P18111 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cdx1P18111 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx1P18111 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx1P18111 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx1P18111 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx1P18111 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx1P18111 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx1P18111 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx1P18111 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx1P18111 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx1P18111 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cdx1P18111 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cdx1P18111 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.57□□□□□ -0.24
Cdx1P18111 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx1P18111 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx1P18111 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.57□□□□□ -0.24
Cdx1P18111 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx1P18111 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdx1P18111 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx1P18111 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx1P18111 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx1P18111 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx1P18111 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx1P18111 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.56□□□□□ -0.24
Cdx1P18111 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx1P18111 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.56□□□□□ -0.24
Cdx1P18111 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx1P18111 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx1P18111 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx1P18111 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.56□□□□□ -0.24
Cdx1P18111 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx1P18111 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx1P18111 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx1P18111 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx1P18111 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cdx1P18111 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms