Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
SncaO55042 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
SncaO55042 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SncaO55042 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SncaO55042 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SncaO55042 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SncaO55042 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SncaO55042 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SncaO55042 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SncaO55042 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SncaO55042 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SncaO55042 Gm11249-201ENSMUST00000117071 859 ntBASIC13.95□□□□□ -0.18
SncaO55042 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SncaO55042 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SncaO55042 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SncaO55042 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
SncaO55042 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SncaO55042 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SncaO55042 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SncaO55042 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SncaO55042 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SncaO55042 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SncaO55042 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SncaO55042 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SncaO55042 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SncaO55042 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SncaO55042 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SncaO55042 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SncaO55042 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SncaO55042 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SncaO55042 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SncaO55042 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.94□□□□□ -0.18
SncaO55042 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.94□□□□□ -0.18
SncaO55042 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SncaO55042 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SncaO55042 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SncaO55042 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
SncaO55042 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SncaO55042 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SncaO55042 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SncaO55042 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SncaO55042 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SncaO55042 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.93□□□□□ -0.18
SncaO55042 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.93□□□□□ -0.18
SncaO55042 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.93□□□□□ -0.18
SncaO55042 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SncaO55042 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SncaO55042 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.93□□□□□ -0.18
SncaO55042 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SncaO55042 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SncaO55042 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
SncaO55042 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SncaO55042 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SncaO55042 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.92□□□□□ -0.18
SncaO55042 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.92□□□□□ -0.18
SncaO55042 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.92□□□□□ -0.18
SncaO55042 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SncaO55042 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SncaO55042 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SncaO55042 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SncaO55042 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms