Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Gm7370-201ENSMUST00000219471 767 ntBASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13d-3J3QMG8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13d-3J3QMG8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13d-3J3QMG8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13d-3J3QMG8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav13d-3J3QMG8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13d-3J3QMG8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav13d-3J3QMG8 Gm13559-201ENSMUST00000120476 863 ntBASIC14.78□□□□□ -0.04
Trav13d-3J3QMG8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13d-3J3QMG8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav13d-3J3QMG8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13d-3J3QMG8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13d-3J3QMG8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13d-3J3QMG8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13d-3J3QMG8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13d-3J3QMG8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13d-3J3QMG8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13d-3J3QMG8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13d-3J3QMG8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13d-3J3QMG8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav13d-3J3QMG8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13d-3J3QMG8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13d-3J3QMG8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
Trav13d-3J3QMG8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13d-3J3QMG8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13d-3J3QMG8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trav13d-3J3QMG8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav13d-3J3QMG8 Gm2274-201ENSMUST00000184539 609 ntBASIC14.77□□□□□ -0.05
Trav13d-3J3QMG8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13d-3J3QMG8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13d-3J3QMG8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav13d-3J3QMG8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13d-3J3QMG8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Trav13d-3J3QMG8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13d-3J3QMG8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13d-3J3QMG8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13d-3J3QMG8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav13d-3J3QMG8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav13d-3J3QMG8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Gm15565-201ENSMUST00000118890 427 ntBASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Mir6982-201ENSMUST00000184354 68 ntBASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms