Protein–RNA interactions for Protein: A8DUK4

Hbb-bs, Beta-globin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-bsA8DUK4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hbb-bsA8DUK4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.94□□□□□ -0.5
Hbb-bsA8DUK4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hbb-bsA8DUK4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hbb-bsA8DUK4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hbb-bsA8DUK4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hbb-bsA8DUK4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Hbb-bsA8DUK4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hbb-bsA8DUK4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hbb-bsA8DUK4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hbb-bsA8DUK4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hbb-bsA8DUK4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hbb-bsA8DUK4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hbb-bsA8DUK4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hbb-bsA8DUK4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Gm43272-201ENSMUST00000200599 1584 ntBASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Hbb-bsA8DUK4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Asic1-205ENSMUST00000228185 1818 ntBASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hbb-bsA8DUK4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hbb-bsA8DUK4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms