Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Dancr-204ENSMUST00000132389 2347 ntBASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-1A0N8R1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-1A0N8R1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-1A0N8R1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Trav12-1A0N8R1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav12-1A0N8R1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-1A0N8R1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.02□□□□□ -0.16
Trav12-1A0N8R1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav12-1A0N8R1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-1A0N8R1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-1A0N8R1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-1A0N8R1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-1A0N8R1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.02□□□□□ -0.16
Trav12-1A0N8R1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-1A0N8R1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-1A0N8R1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-1A0N8R1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-1A0N8R1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav12-1A0N8R1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-1A0N8R1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav12-1A0N8R1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-1A0N8R1 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.02□□□□□ -0.17
Trav12-1A0N8R1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-1A0N8R1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-1A0N8R1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-1A0N8R1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav12-1A0N8R1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms