Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Smim17A0A504 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim17A0A504 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim17A0A504 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim17A0A504 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim17A0A504 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smim17A0A504 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim17A0A504 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim17A0A504 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.32■□□□□ 0.04
Smim17A0A504 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.32■□□□□ 0.04
Smim17A0A504 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 Gm29791-202ENSMUST00000207888 369 ntBASIC15.32■□□□□ 0.04
Smim17A0A504 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Smim17A0A504 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim17A0A504 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim17A0A504 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smim17A0A504 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim17A0A504 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim17A0A504 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Smim17A0A504 Gm12251-201ENSMUST00000117893 792 ntBASIC15.31■□□□□ 0.04
Smim17A0A504 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Smim17A0A504 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.31■□□□□ 0.04
Smim17A0A504 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smim17A0A504 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smim17A0A504 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim17A0A504 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim17A0A504 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smim17A0A504 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smim17A0A504 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim17A0A504 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smim17A0A504 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smim17A0A504 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim17A0A504 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Smim17A0A504 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim17A0A504 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.3■□□□□ 0.04
Smim17A0A504 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smim17A0A504 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim17A0A504 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.3■□□□□ 0.04
Smim17A0A504 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Smim17A0A504 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smim17A0A504 Mir7075-201ENSMUST00000184187 82 ntBASIC15.3■□□□□ 0.04
Smim17A0A504 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.3■□□□□ 0.04
Smim17A0A504 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim17A0A504 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim17A0A504 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Smim17A0A504 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim17A0A504 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim17A0A504 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim17A0A504 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim17A0A504 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Smim17A0A504 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Smim17A0A504 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim17A0A504 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Smim17A0A504 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim17A0A504 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Smim17A0A504 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim17A0A504 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smim17A0A504 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim17A0A504 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim17A0A504 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.29■□□□□ 0.04
Smim17A0A504 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Smim17A0A504 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Smim17A0A504 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Smim17A0A504 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim17A0A504 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.29■□□□□ 0.04
Smim17A0A504 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim17A0A504 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim17A0A504 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim17A0A504 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smim17A0A504 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smim17A0A504 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim17A0A504 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim17A0A504 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim17A0A504 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim17A0A504 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim17A0A504 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smim17A0A504 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Smim17A0A504 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim17A0A504 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smim17A0A504 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Smim17A0A504 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim17A0A504 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smim17A0A504 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Smim17A0A504 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms