Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Gm42569-201ENSMUST00000200539 472 ntBASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Zfp783-201ENSMUST00000095946 670 ntBASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Gm16499-203ENSMUST00000204633 2177 ntBASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Igkv1-88A0A140T8N1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.63
Igkv1-88A0A140T8N1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Igkv1-88A0A140T8N1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Igkv1-88A0A140T8N1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Mir8112-201ENSMUST00000184382 131 ntBASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm42555-201ENSMUST00000199304 1039 ntBASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv1-88A0A140T8N1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm44549-201ENSMUST00000208351 577 ntBASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv1-88A0A140T8N1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms