Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms