Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm11539-201ENSMUST00000119837 557 ntBASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm13436-201ENSMUST00000120418 567 ntBASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm13559-201ENSMUST00000120476 863 ntBASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms