Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gm18669-201ENSMUST00000216049 778 ntBASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Igkv5-45A0A0B4J1J1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-45A0A0B4J1J1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-45A0A0B4J1J1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Igkv5-45A0A0B4J1J1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.14■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.14■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv5-45A0A0B4J1J1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.14■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.14■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.14■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv5-45A0A0B4J1J1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms