Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Gm45417-201ENSMUST00000209533 758 ntBASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv5A0A0B4J1G9 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.58□□□□□ -0.23
Trbv5A0A0B4J1G9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trbv5A0A0B4J1G9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trbv5A0A0B4J1G9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Trbv5A0A0B4J1G9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trbv5A0A0B4J1G9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trbv5A0A0B4J1G9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trbv5A0A0B4J1G9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.58□□□□□ -0.23
Trbv5A0A0B4J1G9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Gm6139-201ENSMUST00000079261 882 ntBASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv5A0A0B4J1G9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv5A0A0B4J1G9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv5A0A0B4J1G9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv5A0A0B4J1G9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv5A0A0B4J1G9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trbv5A0A0B4J1G9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.56□□□□□ -0.24
Trbv5A0A0B4J1G9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trbv5A0A0B4J1G9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv5A0A0B4J1G9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv5A0A0B4J1G9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv5A0A0B4J1G9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv5A0A0B4J1G9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv5A0A0B4J1G9 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms