Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh7A0A0A6YY83 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh7A0A0A6YY83 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh7A0A0A6YY83 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh7A0A0A6YY83 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh7A0A0A6YY83 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Phf7-203ENSMUST00000226565 1971 ntBASIC17.27■□□□□ 0.36
Pcdh7A0A0A6YY83 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh7A0A0A6YY83 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Pcdh7A0A0A6YY83 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh7A0A0A6YY83 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh7A0A0A6YY83 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh7A0A0A6YY83 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms