Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.53■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Mir3081-201ENSMUST00000175305 84 ntBASIC15.53■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ighv1-43A0A0A6YXN5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.52■□□□□ 0.08
Ighv1-43A0A0A6YXN5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Gm18421-201ENSMUST00000204122 625 ntBASIC15.52■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-43A0A0A6YXN5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.52■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.52■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.52■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Gm15794-201ENSMUST00000120182 631 ntBASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Gm28033-201ENSMUST00000184224 96 ntBASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.49■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.49■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Olfr129-201ENSMUST00000122318 993 ntBASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-43A0A0A6YXN5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms