Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Mir1668-201ENSMUST00000184114 107 ntBASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gm7213-201ENSMUST00000215977 950 ntBASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.78□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.78□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.78□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-52A0A0A6YXC3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.78□□□□□ -0.36
Ighv1-52A0A0A6YXC3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.78□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Ighv1-52A0A0A6YXC3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.77□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.77□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms