Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav16A0A075B653 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Zfp783-201ENSMUST00000095946 670 ntBASIC13.04□□□□□ -0.32
Trav16A0A075B653 Gm10493-201ENSMUST00000097270 612 ntBASIC13.04□□□□□ -0.32
Trav16A0A075B653 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16A0A075B653 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav16A0A075B653 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav16A0A075B653 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav16A0A075B653 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav16A0A075B653 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav16A0A075B653 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav16A0A075B653 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav16A0A075B653 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav16A0A075B653 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav16A0A075B653 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav16A0A075B653 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav16A0A075B653 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav16A0A075B653 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Trav16A0A075B653 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.02□□□□□ -0.33
Trav16A0A075B653 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16A0A075B653 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16A0A075B653 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Gm13401-201ENSMUST00000117074 291 ntBASIC13.01□□□□□ -0.33
Trav16A0A075B653 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Mir2861-201ENSMUST00000175539 82 ntBASIC13.01□□□□□ -0.33
Trav16A0A075B653 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.01□□□□□ -0.33
Trav16A0A075B653 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms