Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav16nA0A075B634 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16nA0A075B634 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16nA0A075B634 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav16nA0A075B634 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav16nA0A075B634 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav16nA0A075B634 Gm44549-201ENSMUST00000208351 577 ntBASIC12.76□□□□□ -0.37
Trav16nA0A075B634 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16nA0A075B634 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16nA0A075B634 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16nA0A075B634 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16nA0A075B634 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16nA0A075B634 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav16nA0A075B634 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16nA0A075B634 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16nA0A075B634 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Gm10033-202ENSMUST00000211874 928 ntBASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16nA0A075B634 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Gm11643-201ENSMUST00000119578 864 ntBASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16nA0A075B634 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms