Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9n-4A0A075B631 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Gm15039-201ENSMUST00000118914 875 ntBASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9n-4A0A075B631 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9n-4A0A075B631 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Trav9n-4A0A075B631 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9n-4A0A075B631 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9n-4A0A075B631 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9n-4A0A075B631 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Gm18666-201ENSMUST00000190039 958 ntBASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-4A0A075B631 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Gm12441-201ENSMUST00000121806 588 ntBASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Gm10517-202ENSMUST00000192970 758 ntBASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Gm9694-201ENSMUST00000193347 1189 ntBASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Gm20049-201ENSMUST00000219950 730 ntBASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Gm26917-202ENSMUST00000192833 3329 ntBASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Gm11620-201ENSMUST00000118770 1845 ntBASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-4A0A075B631 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms