Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.33□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms