Protein–RNA interactions for Protein: A0A075B5X4

Ighv8-11, Immunoglobulin heavy variable V8-11 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-11A0A075B5X4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv8-11A0A075B5X4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv8-11A0A075B5X4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv8-11A0A075B5X4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ighv8-11A0A075B5X4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv8-11A0A075B5X4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv8-11A0A075B5X4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv8-11A0A075B5X4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv8-11A0A075B5X4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ighv8-11A0A075B5X4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Gm7791-201ENSMUST00000219066 539 ntBASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Il3ra-202ENSMUST00000223589 738 ntBASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv8-11A0A075B5X4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv8-11A0A075B5X4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Gm11539-201ENSMUST00000119837 557 ntBASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Gm13436-201ENSMUST00000120418 567 ntBASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Gm43799-201ENSMUST00000201845 579 ntBASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Ighv8-11A0A075B5X4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ighv8-11A0A075B5X4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ighv8-11A0A075B5X4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ighv8-11A0A075B5X4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms