Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 MIR1182-201ENST00000408363 97 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 AC124944.2-201ENST00000429866 1242 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 AC138761.5-201ENST00000433967 325 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 SERPINA7P1-201ENST00000443077 631 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 NOP56P2-201ENST00000447491 769 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 RPL35AP28-201ENST00000459730 331 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 RN7SL97P-201ENST00000486780 299 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 MIR4646-201ENST00000580775 63 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 MIR4436B2-201ENST00000581415 91 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 MIR4436B1-201ENST00000583272 91 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 AL162431.4-201ENST00000604674 411 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 MIR6133-201ENST00000617057 108 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 MIR550A3-201ENST00000390735 95 ntBASIC5.66□□□□□ -1.5
NXF3Q9H4D5 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 RPS29P10-201ENST00000439197 166 ntBASIC5.66□□□□□ -1.5
NXF3Q9H4D5 TAAR4P-201ENST00000454843 1039 ntBASIC5.66□□□□□ -1.5
NXF3Q9H4D5 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 Mico1.1-201ENST00000611698 204 ntBASIC5.66□□□□□ -1.5
NXF3Q9H4D5 AC135068.12-201ENST00000637370 931 ntBASIC5.66□□□□□ -1.5
NXF3Q9H4D5 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NXF3Q9H4D5 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 RN7SKP104-201ENST00000362605 328 ntBASIC5.65□□□□□ -1.5
NXF3Q9H4D5 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 SNORA70.6-201ENST00000383934 134 ntBASIC5.65□□□□□ -1.5
NXF3Q9H4D5 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 SEPT7P2-202ENST00000398921 823 ntBASIC5.65□□□□□ -1.5
NXF3Q9H4D5 NACAP7-201ENST00000407371 609 ntBASIC5.65□□□□□ -1.5
NXF3Q9H4D5 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 RPS26P13-201ENST00000419030 330 ntBASIC5.65□□□□□ -1.5
NXF3Q9H4D5 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 VN1R54P-201ENST00000435210 1049 ntBASIC5.65□□□□□ -1.5
NXF3Q9H4D5 PA2G4P6-201ENST00000438325 1197 ntBASIC5.65□□□□□ -1.5
NXF3Q9H4D5 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 AC108161.1-201ENST00000461060 402 ntBASIC5.65□□□□□ -1.5
NXF3Q9H4D5 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NXF3Q9H4D5 AP000797.2-201ENST00000475768 606 ntBASIC5.65□□□□□ -1.5
NXF3Q9H4D5 RPL7P41-201ENST00000485823 957 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms