Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 CBX1P5-201ENST00000475330 559 ntBASIC5.53□□□□□ -1.52
TRIM4Q9C037 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM4Q9C037 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM4Q9C037 AL121594.2-201ENST00000541658 472 ntBASIC5.53□□□□□ -1.52
TRIM4Q9C037 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM4Q9C037 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM4Q9C037 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM4Q9C037 FKBP1AP1-201ENST00000594588 318 ntBASIC5.53□□□□□ -1.52
TRIM4Q9C037 AL133481.2-203ENST00000607558 139 ntBASIC5.53□□□□□ -1.52
TRIM4Q9C037 AC007204.2-201ENST00000615022 616 ntBASIC5.53□□□□□ -1.52
TRIM4Q9C037 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM4Q9C037 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM4Q9C037 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM4Q9C037 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM4Q9C037 LINC01355-201ENST00000566551 5444 ntBASIC5.53□□□□□ -1.52
TRIM4Q9C037 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM4Q9C037 MAPK10-349ENST00000641767 3661 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM4Q9C037 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM4Q9C037 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 SNORA64.1-201ENST00000362600 132 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 RN7SKP28-201ENST00000364770 305 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 SNRPEP6-201ENST00000407465 277 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 AL139128.1-201ENST00000413921 941 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 AL662874.1-201ENST00000426065 230 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 AC127526.2-201ENST00000426436 775 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 RPL34P6-201ENST00000432390 345 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 AC012075.1-201ENST00000436549 580 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 GSTA7P-201ENST00000438425 448 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 AL450996.1-201ENST00000445574 1202 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 AURKAPS1-201ENST00000451805 1212 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 GEMIN2P1-201ENST00000454246 752 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 AC011225.1-201ENST00000457751 369 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 AC092865.4-201ENST00000477936 615 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM4Q9C037 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 AC074050.1-201ENST00000563247 211 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 AL021918.2-201ENST00000613415 194 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 AC026367.3-201ENST00000619032 590 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 OR11H2-202ENST00000641517 1085 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 AL731532.2-201ENST00000623542 1953 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM4Q9C037 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM4Q9C037 AC011933.2-201ENST00000578539 2790 ntBASIC5.52□□□□□ -1.53
TRIM4Q9C037 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TRIM4Q9C037 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM4Q9C037 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM4Q9C037 FBXL21-201ENST00000297158 1305 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 RBPJP2-201ENST00000618187 1444 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 AL731566.1-201ENST00000620490 1937 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM4Q9C037 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TRIM4Q9C037 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TRIM4Q9C037 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM4Q9C037 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TRIM4Q9C037 RNA5SP91-201ENST00000390902 119 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 OR7E101P-201ENST00000400428 513 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 OR6E1P-201ENST00000414424 923 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 RPL23AP27-201ENST00000415161 451 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 AL807761.1-201ENST00000417622 171 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 AL139148.1-201ENST00000427122 680 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM4Q9C037 RPL7P61-201ENST00000451721 751 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM4Q9C037 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM4Q9C037 OR4A42P-201ENST00000531397 938 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 OR8G3P-201ENST00000533406 921 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM4Q9C037 CR383656.6-201ENST00000550518 394 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 HMGN2P6-201ENST00000551091 273 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM4Q9C037 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM4Q9C037 NMNAT1P5-201ENST00000559657 841 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM4Q9C037 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
TRIM4Q9C037 GARSP1-201ENST00000570895 719 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM4Q9C037 MIR4436B2-201ENST00000581415 91 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 MIR4436B1-201ENST00000583272 91 ntBASIC5.51□□□□□ -1.53
TRIM4Q9C037 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM4Q9C037 AC104785.1-201ENST00000603220 588 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms