Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 U6.112-201ENST00000384129 70 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 MIR142-201ENST00000384835 87 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 RPL5P19-201ENST00000404228 893 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AP002530.1-201ENST00000405705 684 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AC245096.1-201ENST00000413104 546 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AL592310.1-201ENST00000414330 671 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 OSTCP5-201ENST00000425293 453 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 ETF1P3-201ENST00000430422 1160 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 USP9YP24-201ENST00000434374 697 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 GAPDHP59-201ENST00000435908 267 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 YWHAZP2-201ENST00000440317 728 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AC097499.1-201ENST00000444277 208 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 USP9YP17-201ENST00000444617 696 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 TIMM8BP2-201ENST00000445940 251 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 HSPE1P22-201ENST00000456856 327 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 PRMT5P1-201ENST00000514351 598 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 OR10V3P-201ENST00000525712 725 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 MORF4L1P3-201ENST00000525966 950 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 LRRC34P1-201ENST00000542742 915 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AC092332.1-201ENST00000563684 829 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 MIR4701-201ENST00000583094 63 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AC244100.4-201ENST00000617747 388 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AC004232.3-201ENST00000622977 525 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AP001052.1-201ENST00000626421 99 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 RBMY1HP-201ENST00000382759 1389 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 MTCO1P18-201ENST00000455518 1419 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 AC015799.1-201ENST00000622996 3122 ntBASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 AC107021.2-201ENST00000567714 2095 ntBASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 ZNF733P-202ENST00000444809 1573 ntBASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 NXF4-202ENST00000416098 1465 ntBASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 AC233289.1-201ENST00000403700 508 ntBASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 RPL7P27-201ENST00000403775 720 ntBASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 SNRPEP6-201ENST00000407465 277 ntBASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 AC010385.1-201ENST00000412374 256 ntBASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 FAM183DP-201ENST00000421987 399 ntBASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 OR5W1P-201ENST00000423705 938 ntBASIC5.86□□□□□ -1.47
TRIM54Q9BYV2 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms