Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.05□□□□□ -1.6
COL21A1Q96P44 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.05□□□□□ -1.6
COL21A1Q96P44 AC016252.1-201ENST00000609721 474 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 AP000894.4-201ENST00000610185 483 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 AL049767.1-202ENST00000637826 242 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL21A1Q96P44 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL21A1Q96P44 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL21A1Q96P44 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
COL21A1Q96P44 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
COL21A1Q96P44 MUC2-202ENST00000613187 4845 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL21A1Q96P44 CDY11P-201ENST00000447168 1651 ntBASIC5.05□□□□□ -1.6
COL21A1Q96P44 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
COL21A1Q96P44 TRIM51GP-201ENST00000534741 1350 ntBASIC5.04□□□□□ -1.6
COL21A1Q96P44 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
COL21A1Q96P44 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
COL21A1Q96P44 AL353796.1-201ENST00000561542 3241 ntBASIC5.04□□□□□ -1.6
COL21A1Q96P44 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL21A1Q96P44 AC007618.1-201ENST00000366455 732 ntBASIC5.04□□□□□ -1.6
COL21A1Q96P44 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.04□□□□□ -1.6
COL21A1Q96P44 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL21A1Q96P44 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.04□□□□□ -1.6
COL21A1Q96P44 AC017019.1-201ENST00000426129 261 ntBASIC5.04□□□□□ -1.6
COL21A1Q96P44 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.04□□□□□ -1.6
COL21A1Q96P44 RANP1-206ENST00000455094 651 ntBASIC5.04□□□□□ -1.6
COL21A1Q96P44 RPL35AP19-201ENST00000469425 329 ntBASIC5.04□□□□□ -1.6
COL21A1Q96P44 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL21A1Q96P44 RPS26P24-201ENST00000497656 331 ntBASIC5.04□□□□□ -1.6
COL21A1Q96P44 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.04□□□□□ -1.6
COL21A1Q96P44 RNA5SP362-201ENST00000516048 118 ntBASIC5.04□□□□□ -1.6
COL21A1Q96P44 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.04□□□□□ -1.6
COL21A1Q96P44 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.04□□□□□ -1.6
COL21A1Q96P44 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.04□□□□□ -1.6
COL21A1Q96P44 AC116158.1-201ENST00000560231 2129 ntBASIC5.04□□□□□ -1.6
COL21A1Q96P44 PRPF19P1-201ENST00000584766 898 ntBASIC5.04□□□□□ -1.6
COL21A1Q96P44 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.04□□□□□ -1.6
COL21A1Q96P44 AC244107.2-201ENST00000611773 76 ntBASIC5.04□□□□□ -1.6
COL21A1Q96P44 MIR8080-201ENST00000622224 89 ntBASIC5.04□□□□□ -1.6
COL21A1Q96P44 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.04□□□□□ -1.6
COL21A1Q96P44 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
COL21A1Q96P44 Z95331.1-201ENST00000623075 23112 ntBASIC5.04□□□□□ -1.6
COL21A1Q96P44 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.04□□□□□ -1.6
COL21A1Q96P44 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.04□□□□□ -1.6
COL21A1Q96P44 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
COL21A1Q96P44 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL21A1Q96P44 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL21A1Q96P44 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL21A1Q96P44 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL21A1Q96P44 THAP12P5-201ENST00000405864 2275 ntBASIC5.03□□□□□ -1.6
COL21A1Q96P44 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL21A1Q96P44 RNA5SP234-201ENST00000363916 119 ntBASIC5.03□□□□□ -1.6
COL21A1Q96P44 RPL21P67-201ENST00000402896 478 ntBASIC5.03□□□□□ -1.6
COL21A1Q96P44 OR3A2-201ENST00000408891 1076 ntBASIC5.03□□□□□ -1.6
COL21A1Q96P44 CTSL3P-202ENST00000412179 788 ntBASIC5.03□□□□□ -1.6
COL21A1Q96P44 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 RPL12P17-201ENST00000432393 498 ntBASIC5.03□□□□□ -1.6
COL21A1Q96P44 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 AC105399.1-202ENST00000447303 205 ntBASIC5.03□□□□□ -1.6
COL21A1Q96P44 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 AL672138.1-201ENST00000450604 1015 ntBASIC5.03□□□□□ -1.6
COL21A1Q96P44 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 AC245028.2-201ENST00000458673 253 ntBASIC5.03□□□□□ -1.6
COL21A1Q96P44 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 EIF3KP3-201ENST00000514461 639 ntBASIC5.03□□□□□ -1.6
COL21A1Q96P44 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.03□□□□□ -1.6
COL21A1Q96P44 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.03□□□□□ -1.6
COL21A1Q96P44 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL21A1Q96P44 AL353684.1-201ENST00000622677 1120 ntBASIC5.03□□□□□ -1.6
COL21A1Q96P44 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 AC099654.6-201ENST00000636487 512 ntBASIC5.03□□□□□ -1.6
COL21A1Q96P44 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL21A1Q96P44 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL21A1Q96P44 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL21A1Q96P44 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL21A1Q96P44 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL21A1Q96P44 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL21A1Q96P44 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
COL21A1Q96P44 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms