Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 AC091057.3-201ENST00000602684 733 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 MTCO2P22-201ENST00000603246 681 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 AC005034.4-201ENST00000603612 899 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 RNU6-84P-201ENST00000607737 102 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHFQ7M4L6 AP005229.2-201ENST00000609980 697 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 AL159169.2-201ENST00000610061 1269 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHFQ7M4L6 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHFQ7M4L6 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHFQ7M4L6 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHFQ7M4L6 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHFQ7M4L6 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHFQ7M4L6 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHFQ7M4L6 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHFQ7M4L6 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHFQ7M4L6 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 RNU6-31P-201ENST00000384388 108 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 U3.28-201ENST00000391249 210 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 BX664727.1-201ENST00000416024 466 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 BTF3P9-201ENST00000418784 283 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 MTCO2P17-201ENST00000424336 677 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 VN1R42P-201ENST00000424651 344 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 AC013262.1-201ENST00000426710 252 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 AL359265.1-201ENST00000440296 795 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 EIF5AP4-201ENST00000441206 465 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 RPL6P30-201ENST00000443382 862 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 OR7E116P-201ENST00000448529 957 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 AC005077.1-201ENST00000449226 375 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 SETP6-201ENST00000479329 568 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 RPL29P23-201ENST00000486188 442 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 PPM1AP1-201ENST00000502740 1135 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 TRAV31-201ENST00000502780 342 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 PSMA2P2-201ENST00000504319 686 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 AC112518.2-201ENST00000508565 425 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 RNA5SP230-201ENST00000517039 122 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 HAUS1P3-201ENST00000523909 662 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHFQ7M4L6 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHFQ7M4L6 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 AL359715.3-201ENST00000569267 2123 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 AC005244.1-201ENST00000582566 339 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 AC068768.2-201ENST00000602352 343 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 AC073137.1-201ENST00000605636 634 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 AC008759.3-201ENST00000613300 508 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 AC015819.1-201ENST00000613588 663 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 uc_338.31-201ENST00000615595 186 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 AC004801.6-201ENST00000616571 978 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 AC245014.3-201ENST00000618589 347 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 AC073342.3-201ENST00000624211 193 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 AC008627.1-201ENST00000517511 1704 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHFQ7M4L6 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHFQ7M4L6 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHFQ7M4L6 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHFQ7M4L6 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 ZNF90P1-201ENST00000480493 1951 ntBASIC5.13□□□□□ -1.59
SHFQ7M4L6 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms