Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
PCDH1Q08174 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDH1Q08174 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH1Q08174 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH1Q08174 CLIC4P3-201ENST00000422221 752 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 AC069154.1-201ENST00000432914 542 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 ATP5LP4-201ENST00000434169 307 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 FTH1P16-201ENST00000435241 552 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDH1Q08174 AC092421.1-201ENST00000448148 418 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 NFU1P2-201ENST00000448700 469 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDH1Q08174 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.78□□□□□ -1.32
PCDH1Q08174 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.78□□□□□ -1.32
PCDH1Q08174 SNORA35.1-201ENST00000458908 128 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 RN7SL834P-201ENST00000461450 286 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 AL672167.3-201ENST00000465951 960 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 AL928654.1-201ENST00000476081 354 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 AC092989.1-201ENST00000481235 277 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH1Q08174 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH1Q08174 SETP14-201ENST00000497538 873 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH1Q08174 AC022483.1-201ENST00000514020 567 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 RNU6-1004P-201ENST00000516584 111 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 CDC42P3-201ENST00000518493 633 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 IGJP1-201ENST00000522682 475 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDH1Q08174 OR5AK1P-201ENST00000524837 922 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDH1Q08174 AC135983.3-201ENST00000528049 1226 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 OR5BC1P-201ENST00000529327 739 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 CR383656.6-201ENST00000550518 394 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.78□□□□□ -1.32
PCDH1Q08174 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH1Q08174 GTF2IP8-201ENST00000560687 584 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH1Q08174 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH1Q08174 AC006504.3-201ENST00000586818 523 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH1Q08174 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 AC024451.4-201ENST00000602578 752 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH1Q08174 AC025449.1-201ENST00000603896 529 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 AL136139.1-201ENST00000605568 222 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.78□□□□□ -1.32
PCDH1Q08174 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH1Q08174 MIR6731-201ENST00000614863 72 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH1Q08174 AL049541.2-201ENST00000626377 555 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.78□□□□□ -1.32
PCDH1Q08174 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
PCDH1Q08174 ZNF658B-201ENST00000602828 3408 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDH1Q08174 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH1Q08174 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
PCDH1Q08174 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH1Q08174 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH1Q08174 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH1Q08174 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDH1Q08174 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH1Q08174 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
PCDH1Q08174 AL021877.2-201ENST00000624442 10684 ntBASIC6.77□□□□□ -1.32
PCDH1Q08174 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.77□□□□□ -1.32
PCDH1Q08174 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
PCDH1Q08174 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.77□□□□□ -1.32
PCDH1Q08174 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDH1Q08174 CUBNP3-201ENST00000457461 1784 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
PCDH1Q08174 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDH1Q08174 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 AC020658.2-201ENST00000559030 4020 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 AC122713.2-201ENST00000624942 3335 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDH1Q08174 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDH1Q08174 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
PCDH1Q08174 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDH1Q08174 RNU6-1263P-201ENST00000384601 106 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 AC138393.2-201ENST00000414742 246 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 GRPEL2P2-201ENST00000421856 670 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 AC012498.1-201ENST00000424037 437 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 TRIM60P3Y-201ENST00000432201 673 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
PCDH1Q08174 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDH1Q08174 GAPDHP53-201ENST00000458397 924 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 RPL34P34-201ENST00000465389 354 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDH1Q08174 RN7SL259P-201ENST00000478499 253 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 AC105252.1-201ENST00000503089 286 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms