Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.51□□□□□ -1.69
LMO4P61968 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMO4P61968 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LMO4P61968 AC011493.1-201ENST00000596753 1632 ntBASIC4.51□□□□□ -1.69
LMO4P61968 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
LMO4P61968 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.51□□□□□ -1.69
LMO4P61968 RPL23P2-201ENST00000320371 421 ntBASIC4.51□□□□□ -1.69
LMO4P61968 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
LMO4P61968 RNU6-386P-201ENST00000362650 107 ntBASIC4.51□□□□□ -1.69
LMO4P61968 RNA5SP507-201ENST00000363603 121 ntBASIC4.51□□□□□ -1.69
LMO4P61968 U8.4-201ENST00000363626 134 ntBASIC4.51□□□□□ -1.69
LMO4P61968 MIR765-201ENST00000390226 114 ntBASIC4.51□□□□□ -1.69
LMO4P61968 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
LMO4P61968 AL645927.1-201ENST00000396783 406 ntBASIC4.51□□□□□ -1.69
LMO4P61968 AL355143.1-201ENST00000407101 841 ntBASIC4.51□□□□□ -1.69
LMO4P61968 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.51□□□□□ -1.69
LMO4P61968 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.51□□□□□ -1.69
LMO4P61968 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.51□□□□□ -1.69
LMO4P61968 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.51□□□□□ -1.69
LMO4P61968 RCC2P2-201ENST00000422174 918 ntBASIC4.51□□□□□ -1.69
LMO4P61968 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.51□□□□□ -1.69
LMO4P61968 RIMKLBP2-201ENST00000424737 654 ntBASIC4.51□□□□□ -1.69
LMO4P61968 AC093655.2-201ENST00000425735 631 ntBASIC4.51□□□□□ -1.69
LMO4P61968 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.51□□□□□ -1.69
LMO4P61968 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.51□□□□□ -1.69
LMO4P61968 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.51□□□□□ -1.69
LMO4P61968 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.51□□□□□ -1.69
LMO4P61968 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.51□□□□□ -1.69
LMO4P61968 AL161722.1-201ENST00000446972 1032 ntBASIC4.51□□□□□ -1.69
LMO4P61968 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.51□□□□□ -1.69
LMO4P61968 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.51□□□□□ -1.69
LMO4P61968 AZGP1P2-201ENST00000454506 345 ntBASIC4.51□□□□□ -1.69
LMO4P61968 RN7SL329P-201ENST00000467740 299 ntBASIC4.51□□□□□ -1.69
LMO4P61968 AC004453.1-201ENST00000487895 408 ntBASIC4.51□□□□□ -1.69
LMO4P61968 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.51□□□□□ -1.69
LMO4P61968 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.51□□□□□ -1.69
LMO4P61968 RPS17P5-201ENST00000498293 408 ntBASIC4.51□□□□□ -1.69
LMO4P61968 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.51□□□□□ -1.69
LMO4P61968 NDUFA5P12-201ENST00000503796 343 ntBASIC4.51□□□□□ -1.69
LMO4P61968 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.51□□□□□ -1.69
LMO4P61968 AC008628.1-201ENST00000508663 265 ntBASIC4.51□□□□□ -1.69
LMO4P61968 AC010460.2-201ENST00000509054 677 ntBASIC4.51□□□□□ -1.69
LMO4P61968 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.51□□□□□ -1.69
LMO4P61968 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
LMO4P61968 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.51□□□□□ -1.69
LMO4P61968 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.51□□□□□ -1.69
LMO4P61968 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.51□□□□□ -1.69
LMO4P61968 AC022832.1-201ENST00000530718 645 ntBASIC4.51□□□□□ -1.69
LMO4P61968 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.51□□□□□ -1.69
LMO4P61968 AC122688.1-201ENST00000541494 223 ntBASIC4.51□□□□□ -1.69
LMO4P61968 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.51□□□□□ -1.69
LMO4P61968 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LMO4P61968 AL121839.1-201ENST00000556233 1185 ntBASIC4.51□□□□□ -1.69
LMO4P61968 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.51□□□□□ -1.69
LMO4P61968 RPL10P14-201ENST00000565265 298 ntBASIC4.51□□□□□ -1.69
LMO4P61968 AC106730.2-201ENST00000566641 540 ntBASIC4.51□□□□□ -1.69
LMO4P61968 AC060780.2-201ENST00000589047 198 ntBASIC4.51□□□□□ -1.69
LMO4P61968 DNAJC19P3-201ENST00000594491 331 ntBASIC4.51□□□□□ -1.69
LMO4P61968 BNIP3P32-201ENST00000600015 554 ntBASIC4.51□□□□□ -1.69
LMO4P61968 AC008536.1-201ENST00000602872 669 ntBASIC4.51□□□□□ -1.69
LMO4P61968 AC009948.4-201ENST00000604692 675 ntBASIC4.51□□□□□ -1.69
LMO4P61968 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC4.51□□□□□ -1.69
LMO4P61968 OR8G7P-201ENST00000616658 848 ntBASIC4.51□□□□□ -1.69
LMO4P61968 AC020763.5-201ENST00000623298 430 ntBASIC4.51□□□□□ -1.69
LMO4P61968 AC097655.1-201ENST00000635075 318 ntBASIC4.51□□□□□ -1.69
LMO4P61968 CASC19-222ENST00000641321 1173 ntBASIC4.51□□□□□ -1.69
LMO4P61968 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
LMO4P61968 ZNF733P-202ENST00000444809 1573 ntBASIC4.51□□□□□ -1.69
LMO4P61968 UGT2B24P-201ENST00000514441 1597 ntBASIC4.51□□□□□ -1.69
LMO4P61968 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC4.51□□□□□ -1.69
LMO4P61968 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LMO4P61968 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC4.51□□□□□ -1.69
LMO4P61968 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
LMO4P61968 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.51□□□□□ -1.69
LMO4P61968 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LMO4P61968 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LMO4P61968 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
LMO4P61968 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LMO4P61968 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LMO4P61968 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LMO4P61968 AL136520.1-201ENST00000600311 1322 ntBASIC4.5□□□□□ -1.69
LMO4P61968 AL627171.1-201ENST00000618845 1308 ntBASIC4.5□□□□□ -1.69
LMO4P61968 OR55B1P-203ENST00000641518 2602 ntBASIC4.5□□□□□ -1.69
LMO4P61968 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LMO4P61968 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
LMO4P61968 RNU1-43P-201ENST00000365052 165 ntBASIC4.5□□□□□ -1.69
LMO4P61968 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LMO4P61968 RNU6-925P-201ENST00000384629 104 ntBASIC4.5□□□□□ -1.69
LMO4P61968 MT-RNR1-201ENST00000389680 954 ntBASIC4.5□□□□□ -1.69
LMO4P61968 RN7SKP213-201ENST00000410746 298 ntBASIC4.5□□□□□ -1.69
LMO4P61968 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC4.5□□□□□ -1.69
LMO4P61968 ARAFP1-201ENST00000422172 605 ntBASIC4.5□□□□□ -1.69
LMO4P61968 OR10T1P-201ENST00000424327 947 ntBASIC4.5□□□□□ -1.69
LMO4P61968 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.5□□□□□ -1.69
LMO4P61968 AC092651.1-201ENST00000426110 312 ntBASIC4.5□□□□□ -1.69
LMO4P61968 NPM1P22-201ENST00000427761 952 ntBASIC4.5□□□□□ -1.69
LMO4P61968 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.5□□□□□ -1.69
LMO4P61968 RPL7P56-201ENST00000429441 717 ntBASIC4.5□□□□□ -1.69
LMO4P61968 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.5□□□□□ -1.69
LMO4P61968 RPL12P17-201ENST00000432393 498 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms