Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RHBDL3P58872 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RHBDL3P58872 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.7□□□□□ -1.34
RHBDL3P58872 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RHBDL3P58872 U3.7-201ENST00000363668 216 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 SNORA58B-201ENST00000364259 136 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 MIR105-2-201ENST00000385083 81 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 RNA5SP498-201ENST00000411342 120 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 AC073508.1-201ENST00000428866 656 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.7□□□□□ -1.34
RHBDL3P58872 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.7□□□□□ -1.34
RHBDL3P58872 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.7□□□□□ -1.34
RHBDL3P58872 AC022431.1-201ENST00000450941 438 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.7□□□□□ -1.34
RHBDL3P58872 AC096741.1-201ENST00000472250 846 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 AC008410.1-201ENST00000483777 339 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.7□□□□□ -1.34
RHBDL3P58872 PGAM1P13-201ENST00000507497 754 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 IMPA1P1-201ENST00000510718 842 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 snoU109.5-201ENST00000516231 132 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 AC018442.3-201ENST00000523025 183 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.7□□□□□ -1.34
RHBDL3P58872 AL136520.1-202ENST00000555494 763 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.7□□□□□ -1.34
RHBDL3P58872 MTND4LP25-201ENST00000570218 163 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.7□□□□□ -1.34
RHBDL3P58872 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.7□□□□□ -1.34
RHBDL3P58872 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.7□□□□□ -1.34
RHBDL3P58872 AL450270.1-201ENST00000606160 391 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 AC004775.1-201ENST00000607389 753 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 AC000068.2-201ENST00000608816 460 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
RHBDL3P58872 C4BPAP1-201ENST00000415474 1893 ntBASIC6.7□□□□□ -1.34
RHBDL3P58872 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RHBDL3P58872 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
RHBDL3P58872 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.7□□□□□ -1.34
RHBDL3P58872 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.7□□□□□ -1.34
RHBDL3P58872 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.7□□□□□ -1.34
RHBDL3P58872 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RHBDL3P58872 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RHBDL3P58872 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RHBDL3P58872 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
RHBDL3P58872 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RHBDL3P58872 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RHBDL3P58872 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.69□□□□□ -1.34
RHBDL3P58872 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
RHBDL3P58872 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RHBDL3P58872 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RHBDL3P58872 RNU6-666P-201ENST00000363499 107 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 RNU4-2-201ENST00000365668 141 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
RHBDL3P58872 AC002524.1-201ENST00000411687 547 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.69□□□□□ -1.34
RHBDL3P58872 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.69□□□□□ -1.34
RHBDL3P58872 VN1R21P-201ENST00000426703 765 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 AL390879.2-203ENST00000426943 1121 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 CRIP1P1-201ENST00000427567 185 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.69□□□□□ -1.34
RHBDL3P58872 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.69□□□□□ -1.34
RHBDL3P58872 CNOT7P2-201ENST00000441051 832 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.69□□□□□ -1.34
RHBDL3P58872 AL606490.1-201ENST00000452266 765 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 RSU1P1-201ENST00000453416 441 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 RPL7P45-201ENST00000455851 743 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 SNRPCP3-201ENST00000474888 476 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 RPS4XP1-201ENST00000482189 787 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 AC093763.2-201ENST00000505334 1223 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.69□□□□□ -1.34
RHBDL3P58872 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RHBDL3P58872 RNA5SP92-201ENST00000516437 110 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 IGLV2-28-201ENST00000520681 304 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.69□□□□□ -1.34
RHBDL3P58872 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.69□□□□□ -1.34
RHBDL3P58872 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RHBDL3P58872 AC126177.5-201ENST00000549599 178 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.69□□□□□ -1.34
RHBDL3P58872 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.69□□□□□ -1.34
RHBDL3P58872 AL163952.1-202ENST00000569625 600 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 AC007423.1-201ENST00000605009 627 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 U1.31-201ENST00000620022 160 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 AC021422.1-201ENST00000621212 473 ntBASIC6.69□□□□□ -1.34
RHBDL3P58872 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.69□□□□□ -1.34
RHBDL3P58872 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.69□□□□□ -1.34
RHBDL3P58872 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
RHBDL3P58872 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.69□□□□□ -1.34
RHBDL3P58872 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
RHBDL3P58872 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RHBDL3P58872 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RHBDL3P58872 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.69□□□□□ -1.34
RHBDL3P58872 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.69□□□□□ -1.34
RHBDL3P58872 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RHBDL3P58872 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RHBDL3P58872 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.68□□□□□ -1.34
RHBDL3P58872 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.68□□□□□ -1.34
RHBDL3P58872 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RHBDL3P58872 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RHBDL3P58872 AL592429.1-201ENST00000403909 1473 ntBASIC6.68□□□□□ -1.34
RHBDL3P58872 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RHBDL3P58872 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms