Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1EP49674 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CSNK1EP49674 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1EP49674 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1EP49674 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1EP49674 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1EP49674 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1EP49674 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1EP49674 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1EP49674 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.33□□□□□ -1.56
CSNK1EP49674 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CSNK1EP49674 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.33□□□□□ -1.56
CSNK1EP49674 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1EP49674 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.33□□□□□ -1.56
CSNK1EP49674 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.33□□□□□ -1.56
CSNK1EP49674 AL121886.1-201ENST00000358609 435 ntBASIC5.33□□□□□ -1.56
CSNK1EP49674 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.33□□□□□ -1.56
CSNK1EP49674 AC136624.1-201ENST00000400791 413 ntBASIC5.33□□□□□ -1.56
CSNK1EP49674 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.33□□□□□ -1.56
CSNK1EP49674 RNA5SP487-201ENST00000410186 122 ntBASIC5.33□□□□□ -1.56
CSNK1EP49674 RNU2-22P-201ENST00000411266 212 ntBASIC5.33□□□□□ -1.56
CSNK1EP49674 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.33□□□□□ -1.56
CSNK1EP49674 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.33□□□□□ -1.56
CSNK1EP49674 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.33□□□□□ -1.56
CSNK1EP49674 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1EP49674 BX119904.3-201ENST00000428194 957 ntBASIC5.33□□□□□ -1.56
CSNK1EP49674 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.33□□□□□ -1.56
CSNK1EP49674 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.33□□□□□ -1.56
CSNK1EP49674 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CSNK1EP49674 AC108161.1-201ENST00000461060 402 ntBASIC5.33□□□□□ -1.56
CSNK1EP49674 AC114982.2-201ENST00000461396 358 ntBASIC5.33□□□□□ -1.56
CSNK1EP49674 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CSNK1EP49674 ATP5LP5-201ENST00000483050 299 ntBASIC5.33□□□□□ -1.56
CSNK1EP49674 RPS4XP20-201ENST00000505751 772 ntBASIC5.33□□□□□ -1.56
CSNK1EP49674 RN7SKP147-201ENST00000517154 244 ntBASIC5.33□□□□□ -1.56
CSNK1EP49674 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.33□□□□□ -1.56
CSNK1EP49674 AC005341.1-201ENST00000571086 708 ntBASIC5.33□□□□□ -1.56
CSNK1EP49674 MIR4480-201ENST00000582492 71 ntBASIC5.33□□□□□ -1.56
CSNK1EP49674 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.33□□□□□ -1.56
CSNK1EP49674 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.33□□□□□ -1.56
CSNK1EP49674 AC090527.3-201ENST00000619041 548 ntBASIC5.33□□□□□ -1.56
CSNK1EP49674 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.33□□□□□ -1.56
CSNK1EP49674 AC000095.2-202ENST00000637415 154 ntBASIC5.33□□□□□ -1.56
CSNK1EP49674 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.33□□□□□ -1.56
CSNK1EP49674 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.33□□□□□ -1.56
CSNK1EP49674 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CSNK1EP49674 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1EP49674 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.33□□□□□ -1.56
CSNK1EP49674 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CSNK1EP49674 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1EP49674 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1EP49674 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CSNK1EP49674 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.32□□□□□ -1.56
CSNK1EP49674 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.32□□□□□ -1.56
CSNK1EP49674 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1EP49674 SNORA56-201ENST00000383966 129 ntBASIC5.32□□□□□ -1.56
CSNK1EP49674 RNU1-136P-201ENST00000384181 164 ntBASIC5.32□□□□□ -1.56
CSNK1EP49674 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CSNK1EP49674 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CSNK1EP49674 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.32□□□□□ -1.56
CSNK1EP49674 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.32□□□□□ -1.56
CSNK1EP49674 RN7SKP17-201ENST00000411242 351 ntBASIC5.32□□□□□ -1.56
CSNK1EP49674 AL034379.1-201ENST00000423216 253 ntBASIC5.32□□□□□ -1.56
CSNK1EP49674 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.32□□□□□ -1.56
CSNK1EP49674 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.32□□□□□ -1.56
CSNK1EP49674 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.32□□□□□ -1.56
CSNK1EP49674 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.32□□□□□ -1.56
CSNK1EP49674 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.32□□□□□ -1.56
CSNK1EP49674 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.32□□□□□ -1.56
CSNK1EP49674 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.32□□□□□ -1.56
CSNK1EP49674 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.32□□□□□ -1.56
CSNK1EP49674 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.32□□□□□ -1.56
CSNK1EP49674 HIGD1AP8-201ENST00000453927 274 ntBASIC5.32□□□□□ -1.56
CSNK1EP49674 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.32□□□□□ -1.56
CSNK1EP49674 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.32□□□□□ -1.56
CSNK1EP49674 KCTD9P6-201ENST00000522306 950 ntBASIC5.32□□□□□ -1.56
CSNK1EP49674 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.32□□□□□ -1.56
CSNK1EP49674 AC092490.3-201ENST00000545370 572 ntBASIC5.32□□□□□ -1.56
CSNK1EP49674 NPM1P42-201ENST00000560329 862 ntBASIC5.32□□□□□ -1.56
CSNK1EP49674 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.32□□□□□ -1.56
CSNK1EP49674 AL353662.3-201ENST00000625131 237 ntBASIC5.32□□□□□ -1.56
CSNK1EP49674 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.32□□□□□ -1.56
CSNK1EP49674 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1EP49674 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1EP49674 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1EP49674 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CSNK1EP49674 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.32□□□□□ -1.56
CSNK1EP49674 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1EP49674 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.32□□□□□ -1.56
CSNK1EP49674 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1EP49674 AC004158.1-201ENST00000564508 4319 ntBASIC5.32□□□□□ -1.56
CSNK1EP49674 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CSNK1EP49674 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CSNK1EP49674 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CSNK1EP49674 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.31□□□□□ -1.56
CSNK1EP49674 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.31□□□□□ -1.56
CSNK1EP49674 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CSNK1EP49674 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CSNK1EP49674 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CSNK1EP49674 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms