Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.11□□□□□ -1.59
APOBEC1P41238 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
APOBEC1P41238 IGKV2-4-201ENST00000523070 340 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 MRPS16P1-201ENST00000523462 412 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.11□□□□□ -1.59
APOBEC1P41238 OR8Q1P-201ENST00000526467 655 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 UBTFL9-201ENST00000534504 1148 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 DUX4L52-201ENST00000549363 777 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 AL512310.9-201ENST00000553311 948 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.11□□□□□ -1.59
APOBEC1P41238 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.11□□□□□ -1.59
APOBEC1P41238 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
APOBEC1P41238 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.11□□□□□ -1.59
APOBEC1P41238 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.11□□□□□ -1.59
APOBEC1P41238 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.11□□□□□ -1.59
APOBEC1P41238 AP003117.1-201ENST00000602771 554 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 AC015712.7-201ENST00000615211 635 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
APOBEC1P41238 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
APOBEC1P41238 AC009120.7-201ENST00000623452 780 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 AC090617.9-201ENST00000623751 147 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 AC005618.4-201ENST00000625053 554 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
APOBEC1P41238 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
APOBEC1P41238 AC092451.3-201ENST00000625067 1343 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 AC011933.2-201ENST00000578539 2790 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
APOBEC1P41238 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.11□□□□□ -1.59
APOBEC1P41238 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.11□□□□□ -1.59
APOBEC1P41238 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.11□□□□□ -1.59
APOBEC1P41238 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
APOBEC1P41238 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
APOBEC1P41238 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
APOBEC1P41238 AC007842.1-201ENST00000597336 2039 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
APOBEC1P41238 AL121839.2-201ENST00000565058 6943 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
APOBEC1P41238 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
APOBEC1P41238 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
APOBEC1P41238 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
APOBEC1P41238 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
APOBEC1P41238 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
APOBEC1P41238 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
APOBEC1P41238 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
APOBEC1P41238 RNA5SP131-201ENST00000365452 119 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.1□□□□□ -1.59
APOBEC1P41238 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.1□□□□□ -1.59
APOBEC1P41238 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
APOBEC1P41238 OOSP1-201ENST00000398992 1270 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 AL009179.1-201ENST00000406085 265 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.1□□□□□ -1.59
APOBEC1P41238 AC093155.2-201ENST00000420734 937 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.1□□□□□ -1.59
APOBEC1P41238 RPL5P2-201ENST00000429598 854 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.1□□□□□ -1.59
APOBEC1P41238 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.1□□□□□ -1.59
APOBEC1P41238 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.1□□□□□ -1.59
APOBEC1P41238 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.1□□□□□ -1.59
APOBEC1P41238 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.1□□□□□ -1.59
APOBEC1P41238 AL353898.1-201ENST00000444055 238 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.1□□□□□ -1.59
APOBEC1P41238 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.1□□□□□ -1.59
APOBEC1P41238 AL450996.1-201ENST00000445574 1202 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.1□□□□□ -1.59
APOBEC1P41238 AL596266.1-201ENST00000448132 400 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 KARSP1-201ENST00000451871 1752 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 PSAT1P4-201ENST00000466500 526 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.1□□□□□ -1.59
APOBEC1P41238 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
APOBEC1P41238 UGT2A3P7-201ENST00000510485 734 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.1□□□□□ -1.59
APOBEC1P41238 AC111000.6-201ENST00000514471 709 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 SNORA43.3-201ENST00000517240 103 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 IGLV3-24-201ENST00000517477 197 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
APOBEC1P41238 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.1□□□□□ -1.59
APOBEC1P41238 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.1□□□□□ -1.59
APOBEC1P41238 OR4A17P-201ENST00000526032 904 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.1□□□□□ -1.59
APOBEC1P41238 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
APOBEC1P41238 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.1□□□□□ -1.59
APOBEC1P41238 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
APOBEC1P41238 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.1□□□□□ -1.59
APOBEC1P41238 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.1□□□□□ -1.59
APOBEC1P41238 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.1□□□□□ -1.59
APOBEC1P41238 AL359715.3-201ENST00000569267 2123 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 AC126365.2-201ENST00000580630 379 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 FAM106CP-201ENST00000582212 507 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.1□□□□□ -1.59
APOBEC1P41238 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.1□□□□□ -1.59
APOBEC1P41238 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 AC011458.1-201ENST00000604034 617 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.1□□□□□ -1.59
APOBEC1P41238 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
APOBEC1P41238 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
APOBEC1P41238 AL158062.1-201ENST00000619632 745 ntBASIC5.1□□□□□ -1.59
APOBEC1P41238 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.1□□□□□ -1.59
APOBEC1P41238 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.1□□□□□ -1.59
APOBEC1P41238 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
APOBEC1P41238 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms