Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 TRIM51GP-201ENST00000534741 1350 ntBASIC5.25□□□□□ -1.57
HLA-DQB2P05538 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 SNORA17.1-201ENST00000362945 126 ntBASIC5.24□□□□□ -1.57
HLA-DQB2P05538 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 AL390316.1-201ENST00000406279 553 ntBASIC5.24□□□□□ -1.57
HLA-DQB2P05538 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 RN7SKP126-201ENST00000411143 300 ntBASIC5.24□□□□□ -1.57
HLA-DQB2P05538 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 AL355433.1-201ENST00000422804 300 ntBASIC5.24□□□□□ -1.57
HLA-DQB2P05538 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 CNOT7P2-201ENST00000441051 832 ntBASIC5.24□□□□□ -1.57
HLA-DQB2P05538 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 OR2AF1P-201ENST00000454899 889 ntBASIC5.24□□□□□ -1.57
HLA-DQB2P05538 RN7SL172P-201ENST00000460535 303 ntBASIC5.24□□□□□ -1.57
HLA-DQB2P05538 RN7SL222P-201ENST00000476452 299 ntBASIC5.24□□□□□ -1.57
HLA-DQB2P05538 NIFKP7-201ENST00000503365 834 ntBASIC5.24□□□□□ -1.57
HLA-DQB2P05538 HIGD1AP14-201ENST00000507617 282 ntBASIC5.24□□□□□ -1.57
HLA-DQB2P05538 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 AC100784.1-201ENST00000522790 310 ntBASIC5.24□□□□□ -1.57
HLA-DQB2P05538 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.24□□□□□ -1.57
HLA-DQB2P05538 OR5D2P-201ENST00000524390 911 ntBASIC5.24□□□□□ -1.57
HLA-DQB2P05538 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 AC016590.3-201ENST00000611171 753 ntBASIC5.24□□□□□ -1.57
HLA-DQB2P05538 AC108359.1-201ENST00000616451 1211 ntBASIC5.24□□□□□ -1.57
HLA-DQB2P05538 MIR6826-201ENST00000617808 98 ntBASIC5.24□□□□□ -1.57
HLA-DQB2P05538 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DQB2P05538 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 AC002525.1-201ENST00000624392 1622 ntBASIC5.23□□□□□ -1.57
HLA-DQB2P05538 AC004158.1-201ENST00000564508 4319 ntBASIC5.23□□□□□ -1.57
HLA-DQB2P05538 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 RPL21P67-201ENST00000402896 478 ntBASIC5.23□□□□□ -1.57
HLA-DQB2P05538 NPM1P37-201ENST00000403105 874 ntBASIC5.23□□□□□ -1.57
HLA-DQB2P05538 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 RN7SKP16-201ENST00000410180 299 ntBASIC5.23□□□□□ -1.57
HLA-DQB2P05538 AP000534.2-201ENST00000412729 568 ntBASIC5.23□□□□□ -1.57
HLA-DQB2P05538 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.23□□□□□ -1.57
HLA-DQB2P05538 AC009238.2-201ENST00000431026 355 ntBASIC5.23□□□□□ -1.57
HLA-DQB2P05538 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 AURKAPS1-201ENST00000451805 1212 ntBASIC5.23□□□□□ -1.57
HLA-DQB2P05538 AC079841.1-201ENST00000481228 950 ntBASIC5.23□□□□□ -1.57
HLA-DQB2P05538 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 AP000619.2-201ENST00000546014 969 ntBASIC5.23□□□□□ -1.57
HLA-DQB2P05538 AC004825.1-201ENST00000555068 586 ntBASIC5.23□□□□□ -1.57
HLA-DQB2P05538 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 AC095055.1-201ENST00000603472 1113 ntBASIC5.23□□□□□ -1.57
HLA-DQB2P05538 AC092944.2-201ENST00000605443 889 ntBASIC5.23□□□□□ -1.57
HLA-DQB2P05538 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 AL138820.1-201ENST00000617901 5305 ntBASIC5.23□□□□□ -1.57
HLA-DQB2P05538 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 ADAM5-202ENST00000399789 1942 ntBASIC5.23□□□□□ -1.57
HLA-DQB2P05538 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DQB2P05538 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 AC092376.2-201ENST00000622621 4116 ntBASIC5.22□□□□□ -1.57
HLA-DQB2P05538 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms