Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHRNA1P02708 SNURFL-201ENST00000309296 343 ntBASIC5.82□□□□□ -1.48
CHRNA1P02708 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHRNA1P02708 SNORA51.8-201ENST00000384234 132 ntBASIC5.82□□□□□ -1.48
CHRNA1P02708 AL354868.1-201ENST00000417077 482 ntBASIC5.82□□□□□ -1.48
CHRNA1P02708 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CHRNA1P02708 EI24P4-201ENST00000423683 1078 ntBASIC5.82□□□□□ -1.48
CHRNA1P02708 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.82□□□□□ -1.48
CHRNA1P02708 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.82□□□□□ -1.48
CHRNA1P02708 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.82□□□□□ -1.48
CHRNA1P02708 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.82□□□□□ -1.48
CHRNA1P02708 GTF2F2P1-201ENST00000511083 675 ntBASIC5.82□□□□□ -1.48
CHRNA1P02708 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.82□□□□□ -1.48
CHRNA1P02708 EIF3KP3-201ENST00000514461 639 ntBASIC5.82□□□□□ -1.48
CHRNA1P02708 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.82□□□□□ -1.48
CHRNA1P02708 AP002373.2-201ENST00000541631 1060 ntBASIC5.82□□□□□ -1.48
CHRNA1P02708 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.82□□□□□ -1.48
CHRNA1P02708 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.82□□□□□ -1.48
CHRNA1P02708 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.82□□□□□ -1.48
CHRNA1P02708 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.82□□□□□ -1.48
CHRNA1P02708 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.82□□□□□ -1.48
CHRNA1P02708 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.82□□□□□ -1.48
CHRNA1P02708 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.82□□□□□ -1.48
CHRNA1P02708 AP001357.1-201ENST00000586304 1053 ntBASIC5.82□□□□□ -1.48
CHRNA1P02708 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.82□□□□□ -1.48
CHRNA1P02708 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.82□□□□□ -1.48
CHRNA1P02708 AC009597.2-201ENST00000604659 592 ntBASIC5.82□□□□□ -1.48
CHRNA1P02708 FAM25E-202ENST00000608562 189 ntBASIC5.82□□□□□ -1.48
CHRNA1P02708 AC015660.5-201ENST00000623238 564 ntBASIC5.82□□□□□ -1.48
CHRNA1P02708 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.82□□□□□ -1.48
CHRNA1P02708 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHRNA1P02708 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.82□□□□□ -1.48
CHRNA1P02708 TET1P1-201ENST00000426627 2301 ntBASIC5.82□□□□□ -1.48
CHRNA1P02708 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CHRNA1P02708 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHRNA1P02708 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHRNA1P02708 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHRNA1P02708 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.82□□□□□ -1.48
CHRNA1P02708 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CHRNA1P02708 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHRNA1P02708 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHRNA1P02708 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHRNA1P02708 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CHRNA1P02708 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CHRNA1P02708 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHRNA1P02708 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CHRNA1P02708 U3.3-201ENST00000362986 216 ntBASIC5.81□□□□□ -1.48
CHRNA1P02708 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHRNA1P02708 MIR600-201ENST00000385007 98 ntBASIC5.81□□□□□ -1.48
CHRNA1P02708 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.81□□□□□ -1.48
CHRNA1P02708 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.81□□□□□ -1.48
CHRNA1P02708 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.81□□□□□ -1.48
CHRNA1P02708 AC006466.1-201ENST00000438721 289 ntBASIC5.81□□□□□ -1.48
CHRNA1P02708 H2AFZP6-201ENST00000444403 394 ntBASIC5.81□□□□□ -1.48
CHRNA1P02708 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHRNA1P02708 SEPT7P3-201ENST00000455017 621 ntBASIC5.81□□□□□ -1.48
CHRNA1P02708 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.81□□□□□ -1.48
CHRNA1P02708 BRD9P1-201ENST00000529855 560 ntBASIC5.81□□□□□ -1.48
CHRNA1P02708 AC005252.1-201ENST00000604518 1063 ntBASIC5.81□□□□□ -1.48
CHRNA1P02708 AC087783.2-201ENST00000605070 562 ntBASIC5.81□□□□□ -1.48
CHRNA1P02708 AL353729.2-201ENST00000605859 1249 ntBASIC5.81□□□□□ -1.48
CHRNA1P02708 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.81□□□□□ -1.48
CHRNA1P02708 AC093799.2-201ENST00000610062 578 ntBASIC5.81□□□□□ -1.48
CHRNA1P02708 AC009950.2-201ENST00000636548 183 ntBASIC5.81□□□□□ -1.48
CHRNA1P02708 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHRNA1P02708 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHRNA1P02708 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHRNA1P02708 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CHRNA1P02708 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.81□□□□□ -1.48
CHRNA1P02708 AL034549.2-201ENST00000618285 3373 ntBASIC5.81□□□□□ -1.48
CHRNA1P02708 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CHRNA1P02708 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHRNA1P02708 CASC19-260ENST00000641828 2001 ntBASIC5.81□□□□□ -1.48
CHRNA1P02708 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CHRNA1P02708 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.8□□□□□ -1.48
CHRNA1P02708 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.8□□□□□ -1.48
CHRNA1P02708 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CHRNA1P02708 AC004656.1-201ENST00000568479 4951 ntBASIC5.8□□□□□ -1.48
CHRNA1P02708 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.8□□□□□ -1.48
CHRNA1P02708 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 AC092747.4-201ENST00000620519 1861 ntBASIC5.8□□□□□ -1.48
CHRNA1P02708 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 SNORA56-201ENST00000383966 129 ntBASIC5.8□□□□□ -1.48
CHRNA1P02708 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CHRNA1P02708 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.8□□□□□ -1.48
CHRNA1P02708 CBX1P3-201ENST00000413296 527 ntBASIC5.8□□□□□ -1.48
CHRNA1P02708 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.8□□□□□ -1.48
CHRNA1P02708 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.8□□□□□ -1.48
CHRNA1P02708 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.8□□□□□ -1.48
CHRNA1P02708 RPS4XP16-201ENST00000427198 791 ntBASIC5.8□□□□□ -1.48
CHRNA1P02708 AL049745.1-201ENST00000433953 286 ntBASIC5.8□□□□□ -1.48
CHRNA1P02708 AC108161.1-201ENST00000461060 402 ntBASIC5.8□□□□□ -1.48
CHRNA1P02708 RPS3AP41-201ENST00000462701 778 ntBASIC5.8□□□□□ -1.48
CHRNA1P02708 AC097484.1-201ENST00000471148 389 ntBASIC5.8□□□□□ -1.48
CHRNA1P02708 RPL37AP8-201ENST00000494116 276 ntBASIC5.8□□□□□ -1.48
CHRNA1P02708 AC105233.1-201ENST00000498840 781 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms