Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AL672138.1-201ENST00000450604 1015 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 RBMY2TP-201ENST00000451162 947 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC28A1O00337 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC28A1O00337 AK4P6-201ENST00000505168 528 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 AC006499.4-201ENST00000510947 694 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 EIF3KP3-201ENST00000514461 639 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 RNA5SP473-201ENST00000516402 125 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 SCARNA16.4-201ENST00000516956 187 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.2□□□□□ -1.58
SLC28A1O00337 AL359219.2-201ENST00000555184 348 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 AL049872.1-201ENST00000556323 322 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC28A1O00337 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC28A1O00337 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC28A1O00337 MTCYBP13-201ENST00000578634 1093 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 RN7SL356P-201ENST00000582228 248 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC28A1O00337 MIR4660-201ENST00000583549 74 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC28A1O00337 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC28A1O00337 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC28A1O00337 AC007683.2-201ENST00000624681 714 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 AC073869.7-201ENST00000640874 297 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SLC28A1O00337 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SLC28A1O00337 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC28A1O00337 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC28A1O00337 AC008079.2-201ENST00000623543 20396 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SLC28A1O00337 AC022417.1-201ENST00000624768 1303 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 OR13C1P-202ENST00000641378 2919 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC28A1O00337 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC28A1O00337 OR9G4-201ENST00000302957 984 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC28A1O00337 RNU6-819P-201ENST00000364116 107 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 RN7SKP28-201ENST00000364770 305 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 RN7SKP153-201ENST00000365026 316 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 RNU6-1263P-201ENST00000384601 106 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 MIR137-201ENST00000385223 102 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC28A1O00337 EEF1B2P8-201ENST00000414101 671 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 PCNPP4-201ENST00000414817 517 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC28A1O00337 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC28A1O00337 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 AC106901.1-201ENST00000425086 698 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC28A1O00337 AC124944.2-201ENST00000429866 1242 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC28A1O00337 RPL12P24-201ENST00000474907 486 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC28A1O00337 RN7SKP99-201ENST00000517028 307 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC28A1O00337 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC28A1O00337 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SLC28A1O00337 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.19□□□□□ -1.58
SLC28A1O00337 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC28A1O00337 AC009268.1-201ENST00000561352 1203 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SLC28A1O00337 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC28A1O00337 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC28A1O00337 AC079315.1-201ENST00000602952 623 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC28A1O00337 AC108865.2-201ENST00000606881 432 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 AL451049.1-201ENST00000608672 497 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC28A1O00337 AC008115.3-201ENST00000614874 549 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 AL118522.2-201ENST00000616045 615 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC28A1O00337 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC28A1O00337 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
SLC28A1O00337 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC28A1O00337 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC28A1O00337 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SLC28A1O00337 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SLC28A1O00337 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC28A1O00337 AC104623.2-202ENST00000623477 4002 ntBASIC5.19□□□□□ -1.58
SLC28A1O00337 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC28A1O00337 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SLC28A1O00337 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SLC28A1O00337 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC28A1O00337 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SLC28A1O00337 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC28A1O00337 MTCO1P7-201ENST00000419523 1542 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SLC28A1O00337 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SLC28A1O00337 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC28A1O00337 Z95331.1-201ENST00000623075 23112 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC28A1O00337 AL356317.1-201ENST00000396110 1436 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 OR9K1P-201ENST00000326513 941 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SLC28A1O00337 AL139039.2-201ENST00000407436 479 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC28A1O00337 COX5BP7-201ENST00000414780 274 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC28A1O00337 GNG5P5-201ENST00000420444 220 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 AC093155.2-201ENST00000420734 937 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms