Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 AC013442.1-201ENST00000397347 228 ntBASIC5.23□□□□□ -1.57
PDLIM1O00151 MIR1203-201ENST00000408812 85 ntBASIC5.23□□□□□ -1.57
PDLIM1O00151 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.23□□□□□ -1.57
PDLIM1O00151 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.23□□□□□ -1.57
PDLIM1O00151 CDY8P-201ENST00000428380 1279 ntBASIC5.23□□□□□ -1.57
PDLIM1O00151 AC002069.1-201ENST00000429649 1159 ntBASIC5.23□□□□□ -1.57
PDLIM1O00151 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM1O00151 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM1O00151 CDY20P-201ENST00000447528 1279 ntBASIC5.23□□□□□ -1.57
PDLIM1O00151 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM1O00151 EIF2S2P5-201ENST00000457635 968 ntBASIC5.23□□□□□ -1.57
PDLIM1O00151 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM1O00151 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.23□□□□□ -1.57
PDLIM1O00151 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM1O00151 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM1O00151 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.23□□□□□ -1.57
PDLIM1O00151 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.23□□□□□ -1.57
PDLIM1O00151 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM1O00151 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM1O00151 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.23□□□□□ -1.57
PDLIM1O00151 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.23□□□□□ -1.57
PDLIM1O00151 AC135626.1-201ENST00000556983 435 ntBASIC5.23□□□□□ -1.57
PDLIM1O00151 AL356801.1-201ENST00000559320 294 ntBASIC5.23□□□□□ -1.57
PDLIM1O00151 AGGF1P7-201ENST00000562369 913 ntBASIC5.23□□□□□ -1.57
PDLIM1O00151 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.23□□□□□ -1.57
PDLIM1O00151 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.23□□□□□ -1.57
PDLIM1O00151 AL713998.2-201ENST00000604538 1198 ntBASIC5.23□□□□□ -1.57
PDLIM1O00151 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.23□□□□□ -1.57
PDLIM1O00151 AL096712.1-201ENST00000614561 159 ntBASIC5.23□□□□□ -1.57
PDLIM1O00151 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 AC006840.1-201ENST00000623069 542 ntBASIC5.23□□□□□ -1.57
PDLIM1O00151 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.23□□□□□ -1.57
PDLIM1O00151 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM1O00151 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.23□□□□□ -1.57
PDLIM1O00151 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.23□□□□□ -1.57
PDLIM1O00151 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDLIM1O00151 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDLIM1O00151 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.23□□□□□ -1.57
PDLIM1O00151 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 VN2R3P-201ENST00000422626 1412 ntBASIC5.23□□□□□ -1.57
PDLIM1O00151 AL929601.4-201ENST00000613011 1341 ntBASIC5.23□□□□□ -1.57
PDLIM1O00151 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDLIM1O00151 AL450345.1-202ENST00000605741 3881 ntBASIC5.23□□□□□ -1.57
PDLIM1O00151 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM1O00151 AC005332.5-201ENST00000591222 2919 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.22□□□□□ -1.57
PDLIM1O00151 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM1O00151 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM1O00151 TLK1P1-201ENST00000456760 2440 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.22□□□□□ -1.57
PDLIM1O00151 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PDLIM1O00151 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM1O00151 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
PDLIM1O00151 HMGN1P20-201ENST00000411849 300 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.22□□□□□ -1.57
PDLIM1O00151 RPL36AP10-201ENST00000421785 322 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 AL035660.1-201ENST00000422041 222 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.22□□□□□ -1.57
PDLIM1O00151 AC079807.1-201ENST00000429993 481 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 GAPDHP34-201ENST00000432112 823 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.22□□□□□ -1.57
PDLIM1O00151 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.22□□□□□ -1.57
PDLIM1O00151 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.22□□□□□ -1.57
PDLIM1O00151 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.22□□□□□ -1.57
PDLIM1O00151 HLA-DPA3-207ENST00000454398 229 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.22□□□□□ -1.57
PDLIM1O00151 NXT1P1-201ENST00000458481 316 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 PSAT1P4-201ENST00000466500 526 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.22□□□□□ -1.57
PDLIM1O00151 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.22□□□□□ -1.57
PDLIM1O00151 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.22□□□□□ -1.57
PDLIM1O00151 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
PDLIM1O00151 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM1O00151 RN7SKP46-201ENST00000515942 234 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 RNA5SP271-201ENST00000516700 88 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 WBP1LP3-201ENST00000523033 208 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.22□□□□□ -1.57
PDLIM1O00151 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.22□□□□□ -1.57
PDLIM1O00151 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.22□□□□□ -1.57
PDLIM1O00151 AL358913.1-201ENST00000554342 121 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 AC006349.1-201ENST00000555526 235 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 AC015914.2-201ENST00000618167 288 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PDLIM1O00151 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
PDLIM1O00151 CDC27P2-201ENST00000425026 1922 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.22□□□□□ -1.57
PDLIM1O00151 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM1O00151 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PDLIM1O00151 DDX18P4-201ENST00000511690 1966 ntBASIC5.22□□□□□ -1.57
PDLIM1O00151 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.21□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms