Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AL136520.1-201ENST00000600311 1322 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AL591135.1-201ENST00000401578 5914 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 RNU6-891P-201ENST00000384280 111 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 SNORA70-201ENST00000384436 135 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 CYCSP12-201ENST00000437729 300 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 VDAC2P4-201ENST00000452925 711 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 SBDSP1-204ENST00000453858 737 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AC006539.1-201ENST00000481419 501 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AC008953.1-201ENST00000497334 318 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AC024558.1-201ENST00000505008 528 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AC105384.2-201ENST00000508433 640 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 SCARNA1-201ENST00000517138 166 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 OR5D2P-201ENST00000524390 911 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 OR8Q1P-201ENST00000526467 655 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 OR10G5P-201ENST00000532733 358 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AC004825.1-201ENST00000555068 586 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AL049779.3-201ENST00000557141 606 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AL049874.4-201ENST00000557593 255 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 OR1AB1P-201ENST00000585564 761 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AC018809.2-201ENST00000602436 3823 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AC002069.2-201ENST00000603580 883 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AL512329.2-201ENST00000607350 548 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AC015802.5-201ENST00000607478 399 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AC006946.3-201ENST00000609791 756 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AL355974.3-201ENST00000617383 467 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 MIR6730-201ENST00000622213 67 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AC136428.4-201ENST00000634254 1155 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 DNM1P47-203ENST00000571780 12667 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 MTND4P21-201ENST00000453886 1357 ntBASIC5.83□□□□□ -1.48
EBF3Q9H4W6 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 AC090220.1-201ENST00000593078 1699 ntBASIC5.83□□□□□ -1.48
EBF3Q9H4W6 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 RNU4-2-201ENST00000365668 141 ntBASIC5.83□□□□□ -1.48
EBF3Q9H4W6 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 PEX12P1-201ENST00000400284 1048 ntBASIC5.83□□□□□ -1.48
EBF3Q9H4W6 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 RPS27AP6-201ENST00000427962 448 ntBASIC5.83□□□□□ -1.48
EBF3Q9H4W6 RPL7L1P9-201ENST00000431298 745 ntBASIC5.83□□□□□ -1.48
EBF3Q9H4W6 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 AC006335.2-201ENST00000437993 330 ntBASIC5.83□□□□□ -1.48
EBF3Q9H4W6 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 AC068587.2-201ENST00000478386 781 ntBASIC5.83□□□□□ -1.48
EBF3Q9H4W6 RN7SL727P-201ENST00000482164 296 ntBASIC5.83□□□□□ -1.48
EBF3Q9H4W6 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 HIGD1AP14-201ENST00000507617 282 ntBASIC5.83□□□□□ -1.48
EBF3Q9H4W6 RN7SKP253-201ENST00000516424 309 ntBASIC5.83□□□□□ -1.48
EBF3Q9H4W6 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 AC060780.2-201ENST00000589047 198 ntBASIC5.83□□□□□ -1.48
EBF3Q9H4W6 AC006116.5-201ENST00000591936 559 ntBASIC5.83□□□□□ -1.48
EBF3Q9H4W6 DNAJC19P3-201ENST00000594491 331 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms