Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLIP4Q8N3C7 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLIP4Q8N3C7 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 ABCC13-202ENST00000463099 3842 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 RNA5SP477-201ENST00000362639 119 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 SNORD51.1-201ENST00000365405 77 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 RNU6-40P-201ENST00000384254 107 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 MIR122-201ENST00000385044 85 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 MIR130A-201ENST00000385274 89 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 RNU6-584P-201ENST00000410350 95 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 NIFKP3-201ENST00000417799 865 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AL136231.1-201ENST00000429407 730 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC126120.1-201ENST00000431082 470 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 ELOCP3-201ENST00000439303 348 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC104849.1-201ENST00000462623 405 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC005165.2-201ENST00000466070 380 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC108729.2-201ENST00000476543 840 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 OR7E157P-201ENST00000494376 911 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 TRAV31-201ENST00000502780 342 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 LSM3P4-201ENST00000502948 309 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 OR5H7P-201ENST00000514084 930 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 Y_RNA.667-201ENST00000516212 107 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 NPM1P52-201ENST00000518264 846 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC005000.1-201ENST00000536192 288 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC139697.1-201ENST00000548429 745 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC026826.3-201ENST00000561747 158 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 LINC00556-201ENST00000569603 412 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC002310.3-201ENST00000569728 723 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 DHFRP1-201ENST00000579682 559 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC006116.5-201ENST00000591936 559 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 ZNF92P2-201ENST00000600543 1059 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC097460.3-201ENST00000623099 442 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AP003499.2-201ENST00000624100 483 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC007683.2-201ENST00000624681 714 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AP001052.1-201ENST00000626421 99 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 OR6C71P-202ENST00000641886 1107 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.27□□□□□ -1.57
CLIP4Q8N3C7 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 RNA5SP326-201ENST00000363209 110 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 OR13Z1P-201ENST00000416141 834 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 MTND4P24-201ENST00000424002 397 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 BX323845.3-201ENST00000428215 527 ntBASIC5.26□□□□□ -1.57
CLIP4Q8N3C7 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms