Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.85□□□□□ -1.31
SYNE4Q8N205 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.85□□□□□ -1.31
SYNE4Q8N205 AC093890.1-201ENST00000502554 540 ntBASIC6.85□□□□□ -1.31
SYNE4Q8N205 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.85□□□□□ -1.31
SYNE4Q8N205 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.85□□□□□ -1.31
SYNE4Q8N205 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.85□□□□□ -1.31
SYNE4Q8N205 MTND2P38-201ENST00000522536 667 ntBASIC6.85□□□□□ -1.31
SYNE4Q8N205 AP001922.4-201ENST00000526967 290 ntBASIC6.85□□□□□ -1.31
SYNE4Q8N205 HNRNPRP2-201ENST00000528421 743 ntBASIC6.85□□□□□ -1.31
SYNE4Q8N205 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SYNE4Q8N205 MTATP6P24-201ENST00000576835 677 ntBASIC6.85□□□□□ -1.31
SYNE4Q8N205 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC6.85□□□□□ -1.31
SYNE4Q8N205 AC114878.2-201ENST00000604863 1251 ntBASIC6.85□□□□□ -1.31
SYNE4Q8N205 AC013244.3-201ENST00000605614 388 ntBASIC6.85□□□□□ -1.31
SYNE4Q8N205 AC084824.5-201ENST00000612009 413 ntBASIC6.85□□□□□ -1.31
SYNE4Q8N205 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.85□□□□□ -1.31
SYNE4Q8N205 LINC01739-205ENST00000641890 573 ntBASIC6.85□□□□□ -1.31
SYNE4Q8N205 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.85□□□□□ -1.31
SYNE4Q8N205 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
SYNE4Q8N205 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
SYNE4Q8N205 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE4Q8N205 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE4Q8N205 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE4Q8N205 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.84□□□□□ -1.31
SYNE4Q8N205 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE4Q8N205 RPL23AP17-201ENST00000401064 499 ntBASIC6.84□□□□□ -1.31
SYNE4Q8N205 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 VPS26BP1-201ENST00000417155 755 ntBASIC6.84□□□□□ -1.31
SYNE4Q8N205 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 GSTM5P1-201ENST00000434751 660 ntBASIC6.84□□□□□ -1.31
SYNE4Q8N205 AC073410.1-201ENST00000435125 589 ntBASIC6.84□□□□□ -1.31
SYNE4Q8N205 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 RPS15AP29-201ENST00000445539 400 ntBASIC6.84□□□□□ -1.31
SYNE4Q8N205 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 AC006463.2-201ENST00000473326 348 ntBASIC6.84□□□□□ -1.31
SYNE4Q8N205 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 AC139103.1-201ENST00000534696 1030 ntBASIC6.84□□□□□ -1.31
SYNE4Q8N205 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 MIR4480-201ENST00000582492 71 ntBASIC6.84□□□□□ -1.31
SYNE4Q8N205 AC040904.1-201ENST00000590850 223 ntBASIC6.84□□□□□ -1.31
SYNE4Q8N205 AP000769.2-201ENST00000602344 396 ntBASIC6.84□□□□□ -1.31
SYNE4Q8N205 AC087468.1-201ENST00000604365 630 ntBASIC6.84□□□□□ -1.31
SYNE4Q8N205 TAS2R6P-201ENST00000605022 826 ntBASIC6.84□□□□□ -1.31
SYNE4Q8N205 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 AC140725.3-201ENST00000616193 880 ntBASIC6.84□□□□□ -1.31
SYNE4Q8N205 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
SYNE4Q8N205 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE4Q8N205 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE4Q8N205 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE4Q8N205 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE4Q8N205 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SYNE4Q8N205 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SYNE4Q8N205 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SYNE4Q8N205 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
SYNE4Q8N205 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SYNE4Q8N205 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 OR55B1P-203ENST00000641518 2602 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SYNE4Q8N205 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 ZNF658B-201ENST00000602828 3408 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SYNE4Q8N205 RNU1-136P-201ENST00000384181 164 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 SNORA67-201ENST00000384423 137 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 AC016397.1-201ENST00000412463 242 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 FAR2P2-201ENST00000413041 594 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 FAR2P4-202ENST00000425399 584 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 AC074367.1-201ENST00000438685 1125 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 CEACAMP9-201ENST00000442990 513 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SYNE4Q8N205 GTF2IP9-201ENST00000502460 301 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 CIR1P1-201ENST00000524055 1133 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 MTND3P12-201ENST00000559068 328 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 AC011840.5-201ENST00000582125 771 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 AC069307.1-201ENST00000602820 447 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 AC034236.3-201ENST00000605999 461 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 AC135803.1-201ENST00000608748 565 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms