Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TPM4P67936 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.86□□□□□ -1.47
TPM4P67936 AL022393.1-201ENST00000625142 1677 ntBASIC5.86□□□□□ -1.47
TPM4P67936 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.86□□□□□ -1.47
TPM4P67936 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TPM4P67936 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TPM4P67936 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TPM4P67936 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.86□□□□□ -1.47
TPM4P67936 AC004386.1-201ENST00000393214 761 ntBASIC5.86□□□□□ -1.47
TPM4P67936 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TPM4P67936 RNA5SP487-201ENST00000410186 122 ntBASIC5.86□□□□□ -1.47
TPM4P67936 OR2AT2P-201ENST00000413438 905 ntBASIC5.86□□□□□ -1.47
TPM4P67936 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.86□□□□□ -1.47
TPM4P67936 Z93019.1-201ENST00000416450 973 ntBASIC5.86□□□□□ -1.47
TPM4P67936 AC013429.2-201ENST00000418798 781 ntBASIC5.86□□□□□ -1.47
TPM4P67936 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.86□□□□□ -1.47
TPM4P67936 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.86□□□□□ -1.47
TPM4P67936 NAP1L4P2-201ENST00000425958 899 ntBASIC5.86□□□□□ -1.47
TPM4P67936 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.86□□□□□ -1.47
TPM4P67936 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.86□□□□□ -1.47
TPM4P67936 AL389925.1-201ENST00000432257 728 ntBASIC5.86□□□□□ -1.47
TPM4P67936 RPL35AP21-201ENST00000437667 333 ntBASIC5.86□□□□□ -1.47
TPM4P67936 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
TPM4P67936 RPS19P6-201ENST00000441327 433 ntBASIC5.86□□□□□ -1.47
TPM4P67936 NOP56P2-201ENST00000447491 769 ntBASIC5.86□□□□□ -1.47
TPM4P67936 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.86□□□□□ -1.47
TPM4P67936 AP006222.1-205ENST00000450734 457 ntBASIC5.86□□□□□ -1.47
TPM4P67936 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.86□□□□□ -1.47
TPM4P67936 RPL7P40-201ENST00000481703 745 ntBASIC5.86□□□□□ -1.47
TPM4P67936 AC090638.1-201ENST00000498296 909 ntBASIC5.86□□□□□ -1.47
TPM4P67936 AC109481.1-201ENST00000509173 282 ntBASIC5.86□□□□□ -1.47
TPM4P67936 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.86□□□□□ -1.47
TPM4P67936 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.86□□□□□ -1.47
TPM4P67936 SNORA43.3-201ENST00000517240 103 ntBASIC5.86□□□□□ -1.47
TPM4P67936 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.86□□□□□ -1.47
TPM4P67936 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TPM4P67936 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.86□□□□□ -1.47
TPM4P67936 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.86□□□□□ -1.47
TPM4P67936 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.86□□□□□ -1.47
TPM4P67936 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.86□□□□□ -1.47
TPM4P67936 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.86□□□□□ -1.47
TPM4P67936 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.86□□□□□ -1.47
TPM4P67936 AL162431.4-201ENST00000604674 411 ntBASIC5.86□□□□□ -1.47
TPM4P67936 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.86□□□□□ -1.47
TPM4P67936 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TPM4P67936 AL672167.1-204ENST00000641875 3017 ntBASIC5.86□□□□□ -1.47
TPM4P67936 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.86□□□□□ -1.47
TPM4P67936 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TPM4P67936 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TPM4P67936 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
TPM4P67936 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TPM4P67936 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
TPM4P67936 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TPM4P67936 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TPM4P67936 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.85□□□□□ -1.47
TPM4P67936 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
TPM4P67936 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TPM4P67936 TRAV35-201ENST00000390462 330 ntBASIC5.85□□□□□ -1.47
TPM4P67936 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
TPM4P67936 MIR1275-201ENST00000408770 80 ntBASIC5.85□□□□□ -1.47
TPM4P67936 CLUHP1-201ENST00000435012 1190 ntBASIC5.85□□□□□ -1.47
TPM4P67936 GAPDHP25-201ENST00000447061 1001 ntBASIC5.85□□□□□ -1.47
TPM4P67936 AC135999.1-201ENST00000478962 479 ntBASIC5.85□□□□□ -1.47
TPM4P67936 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.85□□□□□ -1.47
TPM4P67936 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TPM4P67936 AC027026.1-201ENST00000532323 742 ntBASIC5.85□□□□□ -1.47
TPM4P67936 AC079600.1-201ENST00000550326 297 ntBASIC5.85□□□□□ -1.47
TPM4P67936 AC026826.3-201ENST00000561747 158 ntBASIC5.85□□□□□ -1.47
TPM4P67936 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.85□□□□□ -1.47
TPM4P67936 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TPM4P67936 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.85□□□□□ -1.47
TPM4P67936 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.85□□□□□ -1.47
TPM4P67936 AC022106.2-201ENST00000620114 757 ntBASIC5.85□□□□□ -1.47
TPM4P67936 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.85□□□□□ -1.47
TPM4P67936 AC073869.10-201ENST00000642016 354 ntBASIC5.85□□□□□ -1.47
TPM4P67936 AC021242.1-201ENST00000507315 2035 ntBASIC5.85□□□□□ -1.47
TPM4P67936 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
TPM4P67936 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TPM4P67936 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.85□□□□□ -1.47
TPM4P67936 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.85□□□□□ -1.47
TPM4P67936 AC107068.1-201ENST00000563286 4218 ntBASIC5.85□□□□□ -1.47
TPM4P67936 SCN1A-220ENST00000641603 12506 ntBASIC5.85□□□□□ -1.47
TPM4P67936 AC139713.2-215ENST00000641428 5037 ntBASIC5.84□□□□□ -1.47
TPM4P67936 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.84□□□□□ -1.47
TPM4P67936 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.84□□□□□ -1.47
TPM4P67936 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.84□□□□□ -1.47
TPM4P67936 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.84□□□□□ -1.47
TPM4P67936 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
TPM4P67936 AL035079.1-201ENST00000405210 287 ntBASIC5.84□□□□□ -1.47
TPM4P67936 AL390316.1-201ENST00000406279 553 ntBASIC5.84□□□□□ -1.47
TPM4P67936 SRSF1P1-201ENST00000424058 520 ntBASIC5.84□□□□□ -1.47
TPM4P67936 AC012519.1-201ENST00000424588 610 ntBASIC5.84□□□□□ -1.47
TPM4P67936 AC069154.1-201ENST00000432914 542 ntBASIC5.84□□□□□ -1.47
TPM4P67936 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.84□□□□□ -1.47
TPM4P67936 AL359839.1-201ENST00000451975 1160 ntBASIC5.84□□□□□ -1.47
TPM4P67936 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.84□□□□□ -1.47
TPM4P67936 AC058823.1-201ENST00000485315 474 ntBASIC5.84□□□□□ -1.47
TPM4P67936 AC006427.1-201ENST00000514359 712 ntBASIC5.84□□□□□ -1.47
TPM4P67936 NRBF2P4-201ENST00000520874 850 ntBASIC5.84□□□□□ -1.47
TPM4P67936 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms