Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDN6P56747 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.2□□□□□ -1.58
CLDN6P56747 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDN6P56747 MEMO1P4-201ENST00000453590 386 ntBASIC5.2□□□□□ -1.58
CLDN6P56747 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDN6P56747 PPP1R11P1-201ENST00000486095 376 ntBASIC5.2□□□□□ -1.58
CLDN6P56747 RN7SL205P-201ENST00000490174 284 ntBASIC5.2□□□□□ -1.58
CLDN6P56747 CEACAMP10-202ENST00000495431 496 ntBASIC5.2□□□□□ -1.58
CLDN6P56747 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.2□□□□□ -1.58
CLDN6P56747 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDN6P56747 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDN6P56747 EIF3KP3-201ENST00000514461 639 ntBASIC5.2□□□□□ -1.58
CLDN6P56747 RNA5SP373-201ENST00000517271 95 ntBASIC5.2□□□□□ -1.58
CLDN6P56747 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.2□□□□□ -1.58
CLDN6P56747 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN6P56747 HMGN2P47-201ENST00000559378 272 ntBASIC5.2□□□□□ -1.58
CLDN6P56747 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDN6P56747 RN7SL52P-201ENST00000584271 284 ntBASIC5.2□□□□□ -1.58
CLDN6P56747 AF230666.2-201ENST00000602328 725 ntBASIC5.2□□□□□ -1.58
CLDN6P56747 AC008745.1-201ENST00000604064 271 ntBASIC5.2□□□□□ -1.58
CLDN6P56747 WBP1LP8-201ENST00000617401 327 ntBASIC5.2□□□□□ -1.58
CLDN6P56747 RN7SL722P-201ENST00000617780 284 ntBASIC5.2□□□□□ -1.58
CLDN6P56747 RN7SL565P-201ENST00000618246 284 ntBASIC5.2□□□□□ -1.58
CLDN6P56747 AC087385.3-201ENST00000620477 187 ntBASIC5.2□□□□□ -1.58
CLDN6P56747 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN6P56747 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
CLDN6P56747 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN6P56747 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN6P56747 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN6P56747 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN6P56747 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
CLDN6P56747 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN6P56747 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.2□□□□□ -1.58
CLDN6P56747 AC012618.3-205ENST00000637896 1496 ntBASIC5.2□□□□□ -1.58
CLDN6P56747 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.19□□□□□ -1.58
CLDN6P56747 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN6P56747 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.19□□□□□ -1.58
CLDN6P56747 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN6P56747 Z95114.1-201ENST00000624264 14574 ntBASIC5.19□□□□□ -1.58
CLDN6P56747 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN6P56747 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.19□□□□□ -1.58
CLDN6P56747 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.19□□□□□ -1.58
CLDN6P56747 PANDAR-201ENST00000629595 1506 ntBASIC5.19□□□□□ -1.58
CLDN6P56747 AL022311.1-201ENST00000623726 19416 ntBASIC5.19□□□□□ -1.58
CLDN6P56747 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN6P56747 BCORP1-203ENST00000513194 5093 ntBASIC5.19□□□□□ -1.58
CLDN6P56747 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CLDN6P56747 SNORA17.1-201ENST00000362945 126 ntBASIC5.19□□□□□ -1.58
CLDN6P56747 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN6P56747 AL354868.1-201ENST00000417077 482 ntBASIC5.19□□□□□ -1.58
CLDN6P56747 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.19□□□□□ -1.58
CLDN6P56747 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN6P56747 AC092905.1-201ENST00000467527 949 ntBASIC5.19□□□□□ -1.58
CLDN6P56747 RPL5P22-201ENST00000480199 884 ntBASIC5.19□□□□□ -1.58
CLDN6P56747 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.19□□□□□ -1.58
CLDN6P56747 OR7H2P-201ENST00000513483 306 ntBASIC5.19□□□□□ -1.58
CLDN6P56747 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.19□□□□□ -1.58
CLDN6P56747 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.19□□□□□ -1.58
CLDN6P56747 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CLDN6P56747 AP001357.1-201ENST00000586304 1053 ntBASIC5.19□□□□□ -1.58
CLDN6P56747 AC060766.1-201ENST00000590824 627 ntBASIC5.19□□□□□ -1.58
CLDN6P56747 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CLDN6P56747 AP000769.2-201ENST00000602344 396 ntBASIC5.19□□□□□ -1.58
CLDN6P56747 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.19□□□□□ -1.58
CLDN6P56747 AC090527.3-201ENST00000619041 548 ntBASIC5.19□□□□□ -1.58
CLDN6P56747 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN6P56747 LINC01963-201ENST00000562038 3148 ntBASIC5.19□□□□□ -1.58
CLDN6P56747 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN6P56747 AP000432.2-201ENST00000624164 2048 ntBASIC5.19□□□□□ -1.58
CLDN6P56747 IRF5P1-201ENST00000504852 2164 ntBASIC5.19□□□□□ -1.58
CLDN6P56747 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.19□□□□□ -1.58
CLDN6P56747 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN6P56747 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN6P56747 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CLDN6P56747 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.19□□□□□ -1.58
CLDN6P56747 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN6P56747 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN6P56747 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN6P56747 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.18□□□□□ -1.58
CLDN6P56747 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN6P56747 NCOA4P2-201ENST00000340589 1813 ntBASIC5.18□□□□□ -1.58
CLDN6P56747 ICE2P1-201ENST00000512800 1849 ntBASIC5.18□□□□□ -1.58
CLDN6P56747 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN6P56747 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.18□□□□□ -1.58
CLDN6P56747 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN6P56747 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
CLDN6P56747 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CLDN6P56747 AC013442.1-201ENST00000397347 228 ntBASIC5.18□□□□□ -1.58
CLDN6P56747 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.18□□□□□ -1.58
CLDN6P56747 RAB28P1-201ENST00000411517 641 ntBASIC5.18□□□□□ -1.58
CLDN6P56747 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN6P56747 AC007161.1-204ENST00000423039 460 ntBASIC5.18□□□□□ -1.58
CLDN6P56747 AC091390.1-201ENST00000433904 331 ntBASIC5.18□□□□□ -1.58
CLDN6P56747 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN6P56747 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN6P56747 RPL31P44-201ENST00000447680 377 ntBASIC5.18□□□□□ -1.58
CLDN6P56747 AC104634.1-201ENST00000452720 462 ntBASIC5.18□□□□□ -1.58
CLDN6P56747 AL672167.3-201ENST00000465951 960 ntBASIC5.18□□□□□ -1.58
CLDN6P56747 AC079080.1-201ENST00000479841 822 ntBASIC5.18□□□□□ -1.58
CLDN6P56747 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms