Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC005532.2-201ENST00000467154 373 ntBASIC5.01□□□□□ -1.61
RFC3P40938 RPL32P9-201ENST00000487963 407 ntBASIC5.01□□□□□ -1.61
RFC3P40938 AC069304.1-201ENST00000491593 704 ntBASIC5.01□□□□□ -1.61
RFC3P40938 AC006499.3-201ENST00000506077 748 ntBASIC5.01□□□□□ -1.61
RFC3P40938 AC111000.5-201ENST00000506559 1178 ntBASIC5.01□□□□□ -1.61
RFC3P40938 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.01□□□□□ -1.61
RFC3P40938 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.01□□□□□ -1.61
RFC3P40938 RN7SKP5-201ENST00000517045 272 ntBASIC5.01□□□□□ -1.61
RFC3P40938 PMS2P3-207ENST00000529061 717 ntBASIC5.01□□□□□ -1.61
RFC3P40938 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.01□□□□□ -1.61
RFC3P40938 AC137627.1-201ENST00000545761 289 ntBASIC5.01□□□□□ -1.61
RFC3P40938 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.01□□□□□ -1.61
RFC3P40938 AC126177.5-201ENST00000549599 178 ntBASIC5.01□□□□□ -1.61
RFC3P40938 AL049779.2-201ENST00000553847 315 ntBASIC5.01□□□□□ -1.61
RFC3P40938 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.01□□□□□ -1.61
RFC3P40938 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.01□□□□□ -1.61
RFC3P40938 AP005262.1-201ENST00000582646 997 ntBASIC5.01□□□□□ -1.61
RFC3P40938 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
RFC3P40938 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.01□□□□□ -1.61
RFC3P40938 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RFC3P40938 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFC3P40938 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFC3P40938 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RFC3P40938 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFC3P40938 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFC3P40938 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFC3P40938 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.01□□□□□ -1.61
RFC3P40938 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5□□□□□ -1.61
RFC3P40938 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
RFC3P40938 CR383656.5-201ENST00000547616 1340 ntBASIC5□□□□□ -1.61
RFC3P40938 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
RFC3P40938 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFC3P40938 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFC3P40938 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFC3P40938 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFC3P40938 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
RFC3P40938 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5□□□□□ -1.61
RFC3P40938 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5□□□□□ -1.61
RFC3P40938 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5□□□□□ -1.61
RFC3P40938 MIR133B-201ENST00000362210 119 ntBASIC5□□□□□ -1.61
RFC3P40938 MIR105-2-201ENST00000385083 81 ntBASIC5□□□□□ -1.61
RFC3P40938 MIR223-201ENST00000385204 110 ntBASIC5□□□□□ -1.61
RFC3P40938 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5□□□□□ -1.61
RFC3P40938 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5□□□□□ -1.61
RFC3P40938 AC245047.2-201ENST00000441060 530 ntBASIC5□□□□□ -1.61
RFC3P40938 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5□□□□□ -1.61
RFC3P40938 FAR2P1-206ENST00000449736 709 ntBASIC5□□□□□ -1.61
RFC3P40938 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5□□□□□ -1.61
RFC3P40938 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5□□□□□ -1.61
RFC3P40938 RPS18P6-201ENST00000476880 458 ntBASIC5□□□□□ -1.61
RFC3P40938 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RFC3P40938 AC072052.1-201ENST00000496556 306 ntBASIC5□□□□□ -1.61
RFC3P40938 SUMO2P4-201ENST00000504193 276 ntBASIC5□□□□□ -1.61
RFC3P40938 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5□□□□□ -1.61
RFC3P40938 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5□□□□□ -1.61
RFC3P40938 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5□□□□□ -1.61
RFC3P40938 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5□□□□□ -1.61
RFC3P40938 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5□□□□□ -1.61
RFC3P40938 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5□□□□□ -1.61
RFC3P40938 AL163952.1-202ENST00000569625 600 ntBASIC5□□□□□ -1.61
RFC3P40938 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
RFC3P40938 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5□□□□□ -1.61
RFC3P40938 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RFC3P40938 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5□□□□□ -1.61
RFC3P40938 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5□□□□□ -1.61
RFC3P40938 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5□□□□□ -1.61
RFC3P40938 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5□□□□□ -1.61
RFC3P40938 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFC3P40938 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RFC3P40938 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5□□□□□ -1.61
RFC3P40938 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RFC3P40938 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFC3P40938 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RFC3P40938 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RFC3P40938 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFC3P40938 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RFC3P40938 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5□□□□□ -1.61
RFC3P40938 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFC3P40938 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5□□□□□ -1.61
RFC3P40938 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RFC3P40938 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RFC3P40938 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.99□□□□□ -1.61
RFC3P40938 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFC3P40938 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
RFC3P40938 PROS2P-201ENST00000474651 1951 ntBASIC4.99□□□□□ -1.61
RFC3P40938 AL121886.1-201ENST00000358609 435 ntBASIC4.99□□□□□ -1.61
RFC3P40938 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFC3P40938 SNORA70-201ENST00000384436 135 ntBASIC4.99□□□□□ -1.61
RFC3P40938 RPL11P3-201ENST00000395256 523 ntBASIC4.99□□□□□ -1.61
RFC3P40938 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.99□□□□□ -1.61
RFC3P40938 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.99□□□□□ -1.61
RFC3P40938 AC007394.1-201ENST00000421941 531 ntBASIC4.99□□□□□ -1.61
RFC3P40938 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.99□□□□□ -1.61
RFC3P40938 FAM96AP1-201ENST00000430879 482 ntBASIC4.99□□□□□ -1.61
RFC3P40938 NPM1P48-201ENST00000436002 853 ntBASIC4.99□□□□□ -1.61
RFC3P40938 NANOGP9-201ENST00000439890 892 ntBASIC4.99□□□□□ -1.61
RFC3P40938 CNOT7P2-201ENST00000441051 832 ntBASIC4.99□□□□□ -1.61
RFC3P40938 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.99□□□□□ -1.61
RFC3P40938 AC023271.1-201ENST00000445936 1090 ntBASIC4.99□□□□□ -1.61
RFC3P40938 AC105399.1-202ENST00000447303 205 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms