Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CDH3P22223 MIR130A-201ENST00000385274 89 ntBASIC5.48□□□□□ -1.53
CDH3P22223 MIR143-201ENST00000385300 106 ntBASIC5.48□□□□□ -1.53
CDH3P22223 RPS6P23-201ENST00000413224 722 ntBASIC5.48□□□□□ -1.53
CDH3P22223 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH3P22223 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH3P22223 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH3P22223 AC079355.1-201ENST00000421770 223 ntBASIC5.48□□□□□ -1.53
CDH3P22223 CRIP1P1-201ENST00000427567 185 ntBASIC5.48□□□□□ -1.53
CDH3P22223 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH3P22223 FMO7P-201ENST00000436045 768 ntBASIC5.48□□□□□ -1.53
CDH3P22223 BTBD7P2-201ENST00000441962 620 ntBASIC5.48□□□□□ -1.53
CDH3P22223 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH3P22223 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH3P22223 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
CDH3P22223 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH3P22223 RPL7AP10-201ENST00000481016 791 ntBASIC5.48□□□□□ -1.53
CDH3P22223 DUTP1-201ENST00000493631 470 ntBASIC5.48□□□□□ -1.53
CDH3P22223 RN7SL466P-201ENST00000497546 295 ntBASIC5.48□□□□□ -1.53
CDH3P22223 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH3P22223 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH3P22223 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH3P22223 RPS27AP18-201ENST00000515536 459 ntBASIC5.48□□□□□ -1.53
CDH3P22223 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.48□□□□□ -1.53
CDH3P22223 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH3P22223 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH3P22223 AC084759.1-201ENST00000561168 290 ntBASIC5.48□□□□□ -1.53
CDH3P22223 RBM22P12-201ENST00000567098 1255 ntBASIC5.48□□□□□ -1.53
CDH3P22223 AL163952.1-202ENST00000569625 600 ntBASIC5.48□□□□□ -1.53
CDH3P22223 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.48□□□□□ -1.53
CDH3P22223 AC006115.2-201ENST00000596823 202 ntBASIC5.48□□□□□ -1.53
CDH3P22223 AL513327.3-201ENST00000602618 469 ntBASIC5.48□□□□□ -1.53
CDH3P22223 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.48□□□□□ -1.53
CDH3P22223 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH3P22223 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH3P22223 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH3P22223 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH3P22223 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH3P22223 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CDH3P22223 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH3P22223 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CDH3P22223 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH3P22223 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CDH3P22223 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH3P22223 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH3P22223 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH3P22223 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CDH3P22223 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH3P22223 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH3P22223 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH3P22223 RN7SKP185-201ENST00000362813 326 ntBASIC5.47□□□□□ -1.53
CDH3P22223 U3.7-201ENST00000363668 216 ntBASIC5.47□□□□□ -1.53
CDH3P22223 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH3P22223 U3.25-201ENST00000391209 220 ntBASIC5.47□□□□□ -1.53
CDH3P22223 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH3P22223 RNA5SP296-201ENST00000410523 111 ntBASIC5.47□□□□□ -1.53
CDH3P22223 MTND4LP21-201ENST00000415303 295 ntBASIC5.47□□□□□ -1.53
CDH3P22223 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH3P22223 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH3P22223 FAM204CP-201ENST00000424489 642 ntBASIC5.47□□□□□ -1.53
CDH3P22223 RSL24D1P8-201ENST00000434442 492 ntBASIC5.47□□□□□ -1.53
CDH3P22223 AC242426.1-201ENST00000435270 960 ntBASIC5.47□□□□□ -1.53
CDH3P22223 OR52A4P-202ENST00000481634 799 ntBASIC5.47□□□□□ -1.53
CDH3P22223 AC073610.1-201ENST00000489971 396 ntBASIC5.47□□□□□ -1.53
CDH3P22223 AC069304.1-201ENST00000491593 704 ntBASIC5.47□□□□□ -1.53
CDH3P22223 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.47□□□□□ -1.53
CDH3P22223 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH3P22223 RNA5SP362-201ENST00000516048 118 ntBASIC5.47□□□□□ -1.53
CDH3P22223 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH3P22223 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH3P22223 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH3P22223 DUX4L52-201ENST00000549363 777 ntBASIC5.47□□□□□ -1.53
CDH3P22223 AL049874.4-201ENST00000557593 255 ntBASIC5.47□□□□□ -1.53
CDH3P22223 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH3P22223 AC006272.2-201ENST00000594725 163 ntBASIC5.47□□□□□ -1.53
CDH3P22223 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH3P22223 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH3P22223 AL133481.2-203ENST00000607558 139 ntBASIC5.47□□□□□ -1.53
CDH3P22223 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH3P22223 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.47□□□□□ -1.53
CDH3P22223 CU639417.4-201ENST00000623928 207 ntBASIC5.47□□□□□ -1.53
CDH3P22223 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH3P22223 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH3P22223 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH3P22223 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH3P22223 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH3P22223 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH3P22223 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH3P22223 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH3P22223 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CDH3P22223 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH3P22223 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH3P22223 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
CDH3P22223 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH3P22223 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH3P22223 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDH3P22223 SOCS5P3-201ENST00000425115 1576 ntBASIC5.46□□□□□ -1.53
CDH3P22223 PCAT14-202ENST00000627127 3935 ntBASIC5.46□□□□□ -1.53
CDH3P22223 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.46□□□□□ -1.53
CDH3P22223 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms